RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 TAS2R8Q9NYW2 309 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 PPIAL4EA0A075B759 164 aa13.54□□□□□ -0.24
TRAF3-204ENST00000539721 ANKRD20A5PA0PJZ0 165 aa13.54□□□□□ -0.24
TRAF3-204ENST00000539721 PPIAL4DF5H284 164 aa13.54□□□□□ -0.24
TRAF3-204ENST00000539721 PPIAL4FP0DN26 164 aa13.54□□□□□ -0.24
TRAF3-204ENST00000539721 MUC1P15941 1255 aaPredicted RBP13.54□□□□□ -0.24
TRAF3-204ENST00000539721 COL8A2P25067 703 aa13.54□□□□□ -0.24
TRAF3-204ENST00000539721 LMO1P25800 156 aa13.54□□□□□ -0.24
TRAF3-204ENST00000539721 COL8A1P27658 744 aa13.54□□□□□ -0.24
TRAF3-204ENST00000539721 COL10A1Q03692 680 aa13.54□□□□□ -0.24
TRAF3-204ENST00000539721 ASAH1Q13510 395 aa13.54□□□□□ -0.24
TRAF3-204ENST00000539721 KLF9Q13886 244 aaPredicted RBP13.54□□□□□ -0.24
TRAF3-204ENST00000539721 OCSTAMPQ9BR26 566 aa13.54□□□□□ -0.24
TRAF3-204ENST00000539721 PPA2Q9H2U2 334 aa13.54□□□□□ -0.24
TRAF3-204ENST00000539721 ZNF701Q9NV72 531 aaPredicted RBP13.54□□□□□ -0.24
TRAF3-204ENST00000539721 ETAA1Q9NY74 926 aa13.54□□□□□ -0.24
TRAF3-204ENST00000539721 METRNQ9UJH8 293 aa13.54□□□□□ -0.24
TRAF3-204ENST00000539721 PPIAL4AQ9Y536 164 aa13.54□□□□□ -0.24
TRAF3-204ENST00000539721 LRBAP50851 2863 aa13.54□□□□□ -0.24
TRAF3-204ENST00000539721 LYNX1G3V0Z9 82 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 LGALS8O00214 317 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 PLA2G10O15496 165 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 LYNX1P0DP58 116 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 ASCC1Q8N9N2 400 aaKnown RBP13.53□□□□□ -0.24
TRAF3-204ENST00000539721 ANGPTL6Q8NI99 470 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 SEBOXQ9HB31 216 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-204ENST00000539721 CHMP1AQ9HD42 196 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-204ENST00000539721 C12orf4Q9NQ89 552 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 TRAV38-1A0A0B4J264 116 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 PSPNO60542 156 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 MDH2P40926 338 aaKnown RBP13.53□□□□□ -0.24
TRAF3-204ENST00000539721 TAS2R19P59542 299 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 DYRK1AQ13627 763 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 STUMQ69YW2 141 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 MAFIPQ8WZ33 124 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 ST6GALNAC5Q9BVH7 336 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 CHST6Q9GZX3 395 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 C11orf54Q9H0W9 315 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-204ENST00000539721 DLL4Q9NR61 685 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 ZNF230Q9UIE0 474 aaPredicted RBP13.53□□□□□ -0.24
TRAF3-204ENST00000539721 ZNF222Q9UK12 451 aa13.53□□□□□ -0.24
TRAF3-204ENST00000539721 UTP20O75691 2785 aaKnown RBP13.52□□□□□ -0.24
TRAF3-204ENST00000539721 CENPXA8MT69 81 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 LYRM1O43325 122 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 LY6HO94772 140 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 GYPAP02724 150 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 FCGR3AP08637 254 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 DAOP14920 347 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 DTYMKP23919 212 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 ATXN7L3Q14CW9 347 aaPredicted RBP13.52□□□□□ -0.25
TRAF3-204ENST00000539721 SHEQ5VZ18 495 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 MZT2BQ6NZ67 158 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 HOGA1Q86XE5 327 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 ZNF295-AS1Q8N0V1 137 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 TMEM229BQ8NBD8 167 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 OR4S1Q8NGB4 309 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 CCL19Q99731 98 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 ING3Q9NXR8 418 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 ZNF107Q9UII5 783 aaPredicted RBP13.52□□□□□ -0.25
TRAF3-204ENST00000539721 ANAPC10Q9UM13 185 aa13.52□□□□□ -0.25
TRAF3-204ENST00000539721 TENM4Q6N022 2769 aa13.51□□□□□ -0.25
TRAF3-204ENST00000539721 TMEM82A0PJX8 343 aa13.51□□□□□ -0.25
TRAF3-204ENST00000539721 HLA-DMAP28067 261 aa13.51□□□□□ -0.25
TRAF3-204ENST00000539721 MRPS11P82912 194 aaKnown RBP13.51□□□□□ -0.25
TRAF3-204ENST00000539721 OR52W1Q6IF63 320 aa13.51□□□□□ -0.25
TRAF3-204ENST00000539721 BEST4Q8NFU0 473 aa13.51□□□□□ -0.25
TRAF3-204ENST00000539721 PLPPR1Q8TBJ4 325 aa13.51□□□□□ -0.25
TRAF3-204ENST00000539721 C7orf50Q9BRJ6 194 aaKnown RBP13.51□□□□□ -0.25
TRAF3-204ENST00000539721 TMEM165Q9HC07 324 aa13.51□□□□□ -0.25
TRAF3-204ENST00000539721 NKX6-3A6NJ46 265 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 ZNF736B4DX44 427 aaPredicted RBP13.5□□□□□ -0.25
TRAF3-204ENST00000539721 OVOL3O00110 214 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 RP2O75695 350 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 MT-ND4P03905 459 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 CD3DP04234 171 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 AKAIN1P0CW23 69 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 NAT1P18440 290 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 AMY2BP19961 511 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 FAUP35544 74 aaKnown RBP13.5□□□□□ -0.25
TRAF3-204ENST00000539721 OR3A1P47881 315 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 KCNJ3P48549 501 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 STEAP1BQ6NZ63 245 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 C17orf107Q6ZR85 190 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 ZNF561Q8N587 486 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 PPP1R35Q8TAP8 253 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 SNAPC3Q92966 411 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 C14orf79Q96F83 325 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 SNX22Q96L94 193 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 GAFA1Q96PS6 74 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 CCL13Q99616 98 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 RIMS4Q9H426 269 aaPredicted RBP13.5□□□□□ -0.25
TRAF3-204ENST00000539721 ZNF665Q9H7R5 613 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 HRASLSQ9HDD0 168 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 MYOZ1Q9NP98 299 aaPredicted RBP13.5□□□□□ -0.25
TRAF3-204ENST00000539721 ZNF737O75373 536 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 PTTG1O95997 202 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 NAPSAO96009 420 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 F12P00748 615 aaPredicted RBP13.5□□□□□ -0.25
TRAF3-204ENST00000539721 EFNA4P52798 201 aa13.5□□□□□ -0.25
TRAF3-204ENST00000539721 BTG1P62324 171 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms