RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 ONECUT1Q9UBC0 465 aa10.48□□□□□ -0.73
TSPAN9-207ENST00000539631 LPAR3Q9UBY5 353 aa10.48□□□□□ -0.73
TSPAN9-207ENST00000539631 CDC42EP3Q9UKI2 254 aa10.48□□□□□ -0.73
TSPAN9-207ENST00000539631 TRBV23-1A0A0A0MS06 115 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 TMEM14DPA8MWL7 114 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 OR7C1O76099 320 aaPredicted RBP10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 BPNT1O95861 308 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 TFAP2AP05549 437 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 CLEC2LP0C7M8 214 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 SDC2P34741 201 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 SRP14P37108 136 aaKnown RBP10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 ALDH3B2P48448 385 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 LSM3P62310 102 aaKnown RBP10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 RPL31P62899 125 aaKnown RBP10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 QRFPP83859 136 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 MXD1Q05195 221 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 UNC119Q13432 240 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 MPV17LQ2QL34 196 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 TIMM50Q3ZCQ8 353 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 CHRFAM7AQ494W8 412 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 PAN3Q58A45 887 aaKnown RBP10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 GDPGP1Q6ZNW5 385 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 LINC00596Q86U02 117 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 TPRA1Q86W33 373 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 OR51D1Q8NGF3 324 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 MRPS24Q96EL2 167 aaKnown RBP10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 Q96M66 194 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 WDFY2Q96P53 400 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 PCGF1Q9BSM1 259 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 FUNDC2Q9BWH2 189 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 SIRPDQ9H106 197 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 CST11Q9H112 138 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 STEAP1Q9UHE8 339 aa10.47□□□□□ -0.73
TSPAN9-207ENST00000539631 MEX3AA1L020 520 aaKnown RBP10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 IFITM5A6NNB3 132 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 TOX4O94842 621 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 FSHBP01225 129 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 SLC2A2P11168 524 aaPredicted RBP10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 MMP9P14780 707 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 ARSBP15848 533 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 CCL3L1P16619 93 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 AESQ08117 197 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 ZNF273Q14593 569 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 ATXN7L3Q14CW9 347 aaPredicted RBP10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 C2orf76Q3KRA6 126 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 KLF17Q5JT82 389 aaPredicted RBP10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 ATAD3CQ5T2N8 411 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 METTL11BQ5VVY1 283 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 TMEM200BQ69YZ2 307 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 BRICD5Q6PL45 260 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 TCF23Q7RTU1 214 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 BPIFB2Q8N4F0 458 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 Q8N7P7 452 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 SUMF2Q8NBJ7 301 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 KCNG3Q8TAE7 436 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 FAM3DQ96BQ1 224 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 UPRTQ96BW1 309 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 COQ2Q96H96 371 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 CYYR1Q96J86 154 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 DMRTB1Q96MA1 342 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 TBX15Q96SF7 602 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 IFT22Q9H7X7 185 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 ING3Q9NXR8 418 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 KPTNQ9Y664 436 aa10.46□□□□□ -0.73
TSPAN9-207ENST00000539631 CSPG4Q6UVK1 2322 aa10.46□□□□□ -0.74
TSPAN9-207ENST00000539631 IGHV3OR16-10A0A075B7F0 116 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 A0A0B4J203 849 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 NOTOA8MTQ0 251 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 AIPO00170 330 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 CSN2P05814 226 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 SRD5A1P18405 259 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 CFPP27918 469 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 ERP29P30040 261 aaKnown RBP10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 GLIPR1P48060 266 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 DLX1P56177 255 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 P2RX3P56373 397 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 RPS27AP62979 156 aaKnown RBP10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 PLA2G7Q13093 441 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 KRBOX4Q5JUW0 171 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 SIGIRRQ6IA17 410 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 OR2W3Q7Z3T1 314 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 VMO1Q7Z5L0 202 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 KIR3DL3Q8N743 410 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 NANPQ8TBE9 248 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 PLPPR1Q8TBJ4 325 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 NICN1Q9BSH3 213 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 DPCDQ9BVM2 203 aaPredicted RBP10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 TM2D1Q9BX74 207 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 TMEM59Q9BXS4 323 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 NAA50Q9GZZ1 169 aaKnown RBP10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 WNK2Q9Y3S1 2297 aa10.45□□□□□ -0.74
TSPAN9-207ENST00000539631 A0A0A6YYD4 124 aa10.44□□□□□ -0.74
TSPAN9-207ENST00000539631 TRAV40A0A0B4J280 105 aa10.44□□□□□ -0.74
TSPAN9-207ENST00000539631 TMEM272A0A1B0GTI8 110 aa10.44□□□□□ -0.74
TSPAN9-207ENST00000539631 hADV38S2A0JD32 116 aa10.44□□□□□ -0.74
TSPAN9-207ENST00000539631 FAM90A10PA6NDY2 464 aa10.44□□□□□ -0.74
TSPAN9-207ENST00000539631 FAM90A18PA6NE21 464 aa10.44□□□□□ -0.74
TSPAN9-207ENST00000539631 FAM90A16PA6NEW6 464 aa10.44□□□□□ -0.74
TSPAN9-207ENST00000539631 FAM90A20PA6NIJ5 464 aa10.44□□□□□ -0.74
TSPAN9-207ENST00000539631 FAM90A8PA6NJQ4 464 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms