RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 UBALD2Q8IYN6 164 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 CLDN22Q8N7P3 220 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 GATD1Q8NB37 220 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 OR4C13Q8NGP0 309 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 OR51E1Q8TCB6 317 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 MAFIPQ8WZ33 124 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 NEUROG1Q92886 237 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 FGF14Q92915 247 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 MAGEB18Q96M61 343 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 DOK1Q99704 481 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 TRIM15Q9C019 465 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 AMBNQ9NP70 447 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 EXOSC4Q9NPD3 245 aaKnown RBP3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 IL1RAPQ9NPH3 570 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 B3GAT2Q9NPZ5 323 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 DEPPQ9NTK1 212 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 TAS2R13Q9NYV9 303 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 KCNIP1Q9NZI2 227 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 SPRR3Q9UBC9 169 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 VPS29Q9UBQ0 182 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 HHLA2Q9UM44 414 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 OR51B4Q9Y5P0 310 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 ALG5Q9Y673 324 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 SACSQ9NZJ4 4579 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 PTPRBP23467 1997 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 TENM3Q9P273 2699 aa3.03□□□□□ -1.92
AC055720.1-201ENST00000539552 IGKV1D-8A0A087WSZ0 117 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 DAPL1A0PJW8 107 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 VPS37CA5D8V6 355 aaPredicted RBP3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 TRABD2BA6NFA1 517 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 C15orf65H3BRN8 121 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 K7EQD1 137 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 LAD1O00515 517 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 NOS1APO75052 506 aaPredicted RBP3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 SOX14O95416 240 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 NGFP01138 241 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 CRHP06850 196 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 PGA4P0DJD7 388 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 PGA3P0DJD8 388 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 PGA5P0DJD9 388 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 TCP1P17987 556 aaKnown RBP3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 ADORA1P30542 326 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 CHRNB4P30926 498 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 GPR6P46095 362 aaPredicted RBP3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 OR1D4P47884 311 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 TTPAP49638 278 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 PAX9P55771 341 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 RAB25P57735 213 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 DSCR9P59020 149 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 FLI1Q01543 452 aaPredicted RBP3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 SKP2Q13309 424 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 EDDM3AQ14507 147 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 KLF17Q5JT82 389 aaPredicted RBP3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 WDR38Q5JTN6 314 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 MUC21Q5SSG8 566 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 SYT6Q5T7P8 510 aaPredicted RBP3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 OR2T5Q6IEZ7 315 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 WDR74Q6RFH5 385 aaPredicted RBP3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 C12orf54Q6X4T0 127 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 PEX26Q7Z412 305 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 TMEM144Q7Z5S9 345 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 CARM1Q86X55 608 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 RAB43Q86YS6 212 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 APLFQ8IW19 511 aaPredicted RBP3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 RDH10Q8IZV5 341 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 SLC34A3Q8N130 599 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 GAPTQ8N292 157 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 OR52E2Q8NGJ4 325 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 OR10G7Q8NGN6 311 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 OR2T29Q8NH02 315 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 Q8WTZ3 238 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 BORCS5Q969J3 196 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 TMEM230Q96A57 120 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 SLC25A38Q96DW6 304 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 SFRP2Q96HF1 295 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 DUX3Q96PT4 197 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 PECRQ9BY49 303 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 MS4A6AQ9H2W1 248 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 RNF167Q9H6Y7 350 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 UGT1A8Q9HAW9 530 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 SIX2Q9NPC8 291 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 RBM22Q9NW64 420 aaKnown RBP eCLIP3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 ZNF446Q9NWS9 450 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 DDIT4Q9NX09 232 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 MOKQ9UQ07 419 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 FBXO7Q9Y3I1 522 aa3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 SIPA1L3O60292 1781 aaPredicted RBP3.02□□□□□ -1.93
AC055720.1-201ENST00000539552 ASCC3Q8N3C0 2202 aaKnown RBP3.01□□□□□ -1.93
AC055720.1-201ENST00000539552 PCNX2A6NKB5 2137 aa3.01□□□□□ -1.93
AC055720.1-201ENST00000539552 IGHV4-4A0A075B6R2 117 aa3.01□□□□□ -1.93
AC055720.1-201ENST00000539552 IGHV3OR16-12A0A075B7B8 117 aa3.01□□□□□ -1.93
AC055720.1-201ENST00000539552 A0A0G2JLM5 398 aa3.01□□□□□ -1.93
AC055720.1-201ENST00000539552 CENPVL3A0A0U1RRI6 287 aa3.01□□□□□ -1.93
AC055720.1-201ENST00000539552 ZNF726A6NNF4 738 aa3.01□□□□□ -1.93
AC055720.1-201ENST00000539552 C15orf61A6NNL5 157 aa3.01□□□□□ -1.93
AC055720.1-201ENST00000539552 OR11H12B2RN74 326 aa3.01□□□□□ -1.93
AC055720.1-201ENST00000539552 PRAC2D3DTV9 90 aa3.01□□□□□ -1.93
AC055720.1-201ENST00000539552 K7ENP7 123 aa3.01□□□□□ -1.93
AC055720.1-201ENST00000539552 M0QZK8 103 aa3.01□□□□□ -1.93
AC055720.1-201ENST00000539552 PLIN3O60664 434 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms