RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 ACTG1P63261 375 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 MEF2CQ06413 473 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-210ENST00000539303 SMAGPQ0VAQ4 97 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 ZNF235Q14590 738 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 IMPG1Q17R60 797 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 ZNF404Q494X3 552 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 TMEM31Q5JXX7 168 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 TSPO2Q5TGU0 170 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 NXNL2Q5VZ03 156 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 CST9Q5W186 159 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 Q6P435 159 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 ZNF773Q6PK81 442 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 FAM231DQ6ZW35 169 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 LINC00596Q86U02 117 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 CPNE9Q8IYJ1 553 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 C10orf67Q8IYJ2 551 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 KRT222Q8N1A0 295 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 TMEM256Q8N2U0 113 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 OR52E4Q8NGH9 312 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 PIGXQ8TBF5 258 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 TWIST2Q8WVJ9 160 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 TESCQ96BS2 214 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 ZNF414Q96IQ9 312 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 CCDC42Q96M95 316 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 PACRGQ96M98 296 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-210ENST00000539303 DHRS9Q9BPW9 319 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 DERL2Q9GZP9 239 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 SLC22A4Q9H015 551 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 PARP11Q9NR21 331 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 TAS2R9Q9NYW1 312 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 ZNF222Q9UK12 451 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 GUCA1BQ9UMX6 200 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 TP53TG1Q9Y2A0 90 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 KLF13Q9Y2Y9 288 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-210ENST00000539303 ZNF780BQ9Y6R6 833 aa1.99□□□□□ -2.09
SNHG1-210ENST00000539303 GPATCH8Q9UKJ3 1502 aaKnown RBP1.98□□□□□ -2.09
SNHG1-210ENST00000539303 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.98□□□□□ -2.09
SNHG1-210ENST00000539303 TRAV8-3A0A0A6YYJ7 113 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 IGHV3-72A0A0B4J1Y9 119 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 IGKV6-21A0A0C4DH24 114 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 FAM183AA6NL82 134 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 KRTAP9-6A8MVA2 160 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 C21orf140B9A014 251 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 H0YJW9 148 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 CXCR6O00574 342 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 FFAR1O14842 300 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 SOCS1O15524 211 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 PLIN3O60664 434 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 SCO1O75880 301 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 RPP14O95059 124 aaKnown RBP1.98□□□□□ -2.09
SNHG1-210ENST00000539303 VAMP5O95183 116 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 ISG15P05161 165 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 C8orf88P0DMB2 117 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 AP3S2P59780 193 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 MRPS25P82663 173 aaKnown RBP1.98□□□□□ -2.09
SNHG1-210ENST00000539303 REEP5Q00765 189 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 LOXL1Q08397 574 aaPredicted RBP1.98□□□□□ -2.09
SNHG1-210ENST00000539303 MGAT3Q09327 533 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 SYCNQ0VAF6 134 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 SSX1Q16384 188 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 SPIN4Q56A73 249 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 YIF1BQ5BJH7 314 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 RNASE13Q5GAN3 156 aaKnown RBP1.98□□□□□ -2.09
SNHG1-210ENST00000539303 CLLU1OSQ5K130 101 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 FAM162BQ5T6X4 162 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 LRRN1Q6UXK5 716 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 SPNS3Q6ZMD2 512 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 ZFP2Q6ZN57 461 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 TIFABQ6ZNK6 161 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 FA2HQ7L5A8 372 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 OLIG3Q7RTU3 272 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 PDPNQ86YL7 162 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 ITPRIPQ8IWB1 547 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 HS3ST5Q8IZT8 346 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 TTLQ8NG68 377 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 OR5D18Q8NGL1 313 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 CASTOR1Q8WTX7 329 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 CYGBQ8WWM9 190 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 RAB8BQ92930 207 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 PPCDCQ96CD2 204 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 FXYD5Q96DB9 178 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 LINC00167Q96N53 147 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 RNF157Q96PX1 679 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 ZNF649Q9BS31 505 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 ULBP1Q9BZM6 244 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 MS4A6AQ9H2W1 248 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 MAP1LC3AQ9H492 121 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 PLEKHF2Q9H8W4 249 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 C8orf17Q9NRJ1 99 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 ZNRD1Q9P1U0 126 aa1.98□□□□□ -2.09
SNHG1-210ENST00000539303 DOCK8Q8NF50 2099 aa1.97□□□□□ -2.09
SNHG1-210ENST00000539303 IGHV3-49A0A0A0MS15 119 aa1.97□□□□□ -2.09
SNHG1-210ENST00000539303 IGHV7-4-1A0A0J9YVY3 117 aa1.97□□□□□ -2.09
SNHG1-210ENST00000539303 TMEM223A0PJW6 202 aa1.97□□□□□ -2.09
SNHG1-210ENST00000539303 TMEM72A0PK05 275 aa1.97□□□□□ -2.09
SNHG1-210ENST00000539303 MYBPHLA2RUH7 354 aa1.97□□□□□ -2.09
SNHG1-210ENST00000539303 OR6C70A6NIJ9 312 aa1.97□□□□□ -2.09
SNHG1-210ENST00000539303 CD300LBA8K4G0 201 aa1.97□□□□□ -2.09
SNHG1-210ENST00000539303 TMEM114B3SHH9 223 aa1.97□□□□□ -2.09
SNHG1-210ENST00000539303 C8orf87E5RJ46 101 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms