RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 MICBQ29980 383 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 AVPI1Q5T686 147 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 Q6P435 159 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 DCDC5Q6ZRR9 648 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 TRAPPC6BQ86SZ2 158 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 FAM90A1Q86YD7 464 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 CD177Q8N6Q3 437 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 SUMF2Q8NBJ7 301 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 SDHCQ99643 169 aaPredicted RBP11.85□□□□□ -0.51
CD4-208ENST00000538827 FAAP24Q9BTP7 215 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 CCDC32Q9BV29 185 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 DPCDQ9BVM2 203 aaPredicted RBP11.85□□□□□ -0.51
CD4-208ENST00000538827 PPA2Q9H2U2 334 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 LIME1Q9H400 295 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 SPACA1Q9HBV2 294 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 IFT46Q9NQC8 304 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 DLL4Q9NR61 685 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 ING3Q9NXR8 418 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 RCC2Q9P258 522 aaKnown RBP11.85□□□□□ -0.51
CD4-208ENST00000538827 AK3Q9UIJ7 227 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 METRNQ9UJH8 293 aa11.85□□□□□ -0.51
CD4-208ENST00000538827 IGKV1D-17A0A075B6S4 117 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 TRAV38-1A0A0B4J264 116 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 TRAV24A0A0B4J272 114 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 MEIOCA2RUB1 952 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 MCRIP1C9JLW8 97 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 GABARAPH6UMI1 98 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 SLC33A1O00400 549 aaPredicted RBP11.84□□□□□ -0.51
CD4-208ENST00000538827 CTDSPLO15194 276 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 PPIHO43447 177 aaKnown RBP11.84□□□□□ -0.51
CD4-208ENST00000538827 EFNA4P52798 201 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 KRTAP10-9P60411 292 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 MRPS10P82664 201 aaKnown RBP11.84□□□□□ -0.51
CD4-208ENST00000538827 ATXN7L3Q14CW9 347 aaPredicted RBP11.84□□□□□ -0.51
CD4-208ENST00000538827 ZNF146Q15072 292 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 STUMQ69YW2 141 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 PEG10Q86TG7 708 aaKnown RBP11.84□□□□□ -0.51
CD4-208ENST00000538827 BPIFB2Q8N4F0 458 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 OR52I2Q8NH67 350 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 SETD6Q8TBK2 473 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 SMIM4Q8WVI0 70 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 FCAMRQ8WWV6 532 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 CMSS1Q9BQ75 279 aaKnown RBP11.84□□□□□ -0.51
CD4-208ENST00000538827 HDHD3Q9BSH5 251 aaPredicted RBP11.84□□□□□ -0.51
CD4-208ENST00000538827 CHST6Q9GZX3 395 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 ZNF701Q9NV72 531 aaPredicted RBP11.84□□□□□ -0.51
CD4-208ENST00000538827 HSF4Q9ULV5 492 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 PLEKHA6Q9Y2H5 1048 aa11.84□□□□□ -0.51
CD4-208ENST00000538827 LINC00854A0A1B0GVQ3 168 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 SERPINE3A8MV23 424 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 H3BUI4 141 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 OVOL3O00110 214 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 RP2O75695 350 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 TPPPO94811 219 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 LPLP06858 475 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 CSF3P09919 207 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 IL7P13232 177 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 MUC1P15941 1255 aaPredicted RBP11.83□□□□□ -0.52
CD4-208ENST00000538827 PRDX2P32119 198 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 BTG1P62324 171 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 RBM39Q14498 530 aaKnown RBP11.83□□□□□ -0.52
CD4-208ENST00000538827 ZMYND11Q15326 602 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 BAK1Q16611 211 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 PNLIPRP3Q17RR3 467 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 HACD4Q5VWC8 232 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 TEX36Q5VZQ5 186 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 ZNF57Q68EA5 555 aaPredicted RBP11.83□□□□□ -0.52
CD4-208ENST00000538827 TMEM185AQ8NFB2 350 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 ST8SIA4Q92187 359 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 TIMD4Q96H15 378 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 CCL13Q99616 98 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 IFT22Q9H7X7 185 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 MYOZ1Q9NP98 299 aaPredicted RBP11.83□□□□□ -0.52
CD4-208ENST00000538827 ETAA1Q9NY74 926 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 KCNK7Q9Y2U2 307 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 USF3Q68DE3 2245 aa11.83□□□□□ -0.52
CD4-208ENST00000538827 AKAP6Q13023 2319 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 A0A1B0GW55 424 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 A0A1W2PQ09 198 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 GSTZ1O43708 216 aaPredicted RBP11.82□□□□□ -0.52
CD4-208ENST00000538827 SSX4O60224 188 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 UPK1BO75841 260 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 IGHV4-39P01824 125 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 DUX4L2P0CJ85 424 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 DUX4L3P0CJ86 424 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 DUX4L4P0CJ87 422 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 DUX4L5P0CJ88 424 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 DUX4L6P0CJ89 424 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 DUX4L7P0CJ90 424 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 SELLP14151 372 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 GDNFP39905 211 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 MRPS11P82912 194 aaKnown RBP11.82□□□□□ -0.52
CD4-208ENST00000538827 DCTN2Q13561 401 aaKnown RBP11.82□□□□□ -0.52
CD4-208ENST00000538827 EDDM3AQ14507 147 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 DUX4L9Q6RFH8 374 aaPredicted RBP11.82□□□□□ -0.52
CD4-208ENST00000538827 FAM216BQ8N7L0 139 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 ANGPTL6Q8NI99 470 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 IGFBPL1Q8WX77 278 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 MAFIPQ8WZ33 124 aa11.82□□□□□ -0.52
CD4-208ENST00000538827 PERPQ96FX8 193 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms