RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 OR4D6Q8NGJ1 314 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 MUC7Q8TAX7 377 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 LRGUKQ96M69 825 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 TBX5Q99593 518 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 SEBOXQ9HB31 216 aaPredicted RBP11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 ADGRL4Q9HBW9 690 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 EXOSC4Q9NPD3 245 aaKnown RBP11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 TAS2R3Q9NYW6 316 aa11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 HUWE1Q7Z6Z7 4374 aaKnown RBP11.04□□□□□ -0.64
SMARCA4-206ENST00000538456 SACSQ9NZJ4 4579 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 ODAMA1E959 279 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 OOSP1A8MZH6 123 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 SERPINA3P01011 423 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 IGHV3-7P01780 117 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 RBP2P50120 134 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 GP2P55259 537 aaKnown RBP11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 CDC42P60953 191 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 RIPK1Q13546 671 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 LCNL1Q6ZST4 164 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 MEPCEQ7L2J0 689 aaKnown RBP11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 SLC35E3Q7Z769 313 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 CATSPERDQ86XM0 798 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 ADGRG5Q8IZF4 528 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 OR5M8Q8NGP6 311 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 CORO2AQ92828 525 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 LEAP2Q969E1 77 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 ADI1Q9BV57 179 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 CLN6Q9NWW5 311 aa11.03□□□□□ -0.64
SMARCA4-206ENST00000538456 FUOMA2VDF0 154 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 SEC14L6B5MCN3 397 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 SH2D1BO14796 132 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 RPLP1P05386 114 aaKnown RBP11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 KRT8P05787 483 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 ANXA8P13928 327 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 ATP1B3P54709 279 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 MTCP1P56278 107 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 DIAPH2-AS1Q14236 149 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 ATXN7L3Q14CW9 347 aaPredicted RBP11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 KRBOX4Q5JUW0 171 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 C9orf66Q5T8R8 295 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 FOXRED2Q8IWF2 684 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 STPG2Q8N412 459 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 Q8NFD4 153 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 RFT1Q96AA3 541 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 MNTQ99583 582 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 HMG20AQ9NP66 347 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 POMPQ9Y244 141 aa11.02□□□□□ -0.65
SMARCA4-206ENST00000538456 A0A087X0M5 115 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 LOC107986453A0A1B0GWG9 222 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 A0A1B0GX30 115 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 A0A1W2PPI3 338 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 FAM90A18PA6NE21 464 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 FAM90A16PA6NEW6 464 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 FAM90A20PA6NIJ5 464 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 LINC01548A6NM66 108 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 FAM90A9PA6NNJ1 464 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 FAM90A12PA8MX19 464 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 FAM90A5PA8MXJ8 464 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 FAM90A15PP0C7V4 464 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 FAM90A13PP0C7W8 464 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 FAM90A14PP0C7W9 464 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 FAM90A24PP0C7X0 464 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 ZNF44P15621 663 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 CRISP1P54107 249 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 C17orf58Q2M2W7 97 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 C1orf146Q5VVC0 180 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 THNSL2Q86YJ6 484 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 COMMD1Q8N668 190 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 OR8U1Q8NH10 309 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 OR9G1Q8NH87 305 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 CANT1Q8WVQ1 401 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 ASB9Q96DX5 294 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 COQ2Q96H96 371 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 KIRREL1Q96J84 757 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 PPIL3Q9H2H8 161 aaKnown RBP11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 DCLRE1BQ9H816 532 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 PCDHB16Q9NRJ7 776 aa11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 H2AFY2Q9P0M6 372 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 AMMECR1Q9Y4X0 333 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-206ENST00000538456 IGKV1-9A0A0C4DH69 117 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 IGKV1-12A0A0C4DH73 117 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 ZNF729A6NN14 1252 aaPredicted RBP11□□□□□ -0.65
SMARCA4-206ENST00000538456 HSPB6O14558 160 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 FGF16O43320 207 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 APOL3O95236 402 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 LY86O95711 162 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 IGKV1D-33P01593 117 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 IGKV1-33P01594 117 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 IGKV1D-12P01611 117 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 IGHG2P01859 326 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 GLP1RP43220 463 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 GNG10P50151 68 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 PDZK1IP1Q13113 114 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 PTGES3Q15185 160 aaKnown RBP11□□□□□ -0.65
SMARCA4-206ENST00000538456 LTC4SQ16873 150 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 TEX38Q6PEX7 206 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 C10orf67Q8IYJ2 551 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 RDH10Q8IZV5 341 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 PRSS35Q8N3Z0 413 aa11□□□□□ -0.65
SMARCA4-206ENST00000538456 TCEANCQ8N8B7 351 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms