RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 STPG2Q8N412 459 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 FAM71E2Q8N5Q1 922 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 ZNF565Q8N9K5 539 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 NAXEQ8NCW5 288 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 BVESQ8NE79 360 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 OR4A4PQ8NGN8 299 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 WNT2BQ93097 391 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 ARL11Q969Q4 196 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 CXorf58Q96LI9 332 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 CNTNAP3BQ96NU0 1288 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 REG4Q9BYZ8 158 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 CNTNAP3Q9BZ76 1288 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 Q9N2K0 584 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 PARD6AQ9NPB6 346 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 ZC4H2Q9NQZ6 224 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 NSG2Q9Y328 171 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 ATP23Q9Y6H3 246 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 SPEGQ15772 3267 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 CACNA1GO43497 2377 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 DNAJC13O75165 2243 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 ZNF318Q5VUA4 2279 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 SPAARA0A1B0GVQ0 90 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 ZNF503-AS2A6NEH8 195 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 IQCF6A8MYZ5 107 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 AHRRA9YTQ3 701 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 TRDCB7Z8K6 153 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 NPIPB11E5RHQ5 1161 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 GPR31O00270 319 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 MSTNO14793 375 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 FGF16O43320 207 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 SMPD2O60906 423 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 DEDDO75618 318 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 CEACAM4O75871 244 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 JTBO76095 146 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 ACAA1P09110 424 aaPredicted RBP5.68□□□□□ -1.5
USP28-206ENST00000538224 OR5AC1P0C628 307 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 CCL2P13500 99 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 BTF3P20290 206 aaKnown RBP5.68□□□□□ -1.5
USP28-206ENST00000538224 PVALBP20472 110 aaPredicted RBP5.68□□□□□ -1.5
USP28-206ENST00000538224 COX5AP20674 150 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 AADACP22760 399 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 WNT5AP41221 380 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 CCL11P51671 97 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 FOXG1P55316 489 aaPredicted RBP5.68□□□□□ -1.5
USP28-206ENST00000538224 PRSS12P56730 875 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 PPP1CBP62140 327 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 HLA-DRB3P79483 266 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 MZT1Q08AG7 82 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 RSPO4Q2I0M5 234 aaPredicted RBP5.68□□□□□ -1.5
USP28-206ENST00000538224 RNFT1Q5M7Z0 435 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 ATP1A1-AS1Q5TC04 95 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 GPR157Q5UAW9 335 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 GGNBP1Q5YKI7 109 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 ZNF585AQ6P3V2 769 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 HAGHLQ6PII5 290 aaPredicted RBP5.68□□□□□ -1.5
USP28-206ENST00000538224 VASH2Q86V25 355 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 CMTM1Q8IZ96 169 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 FAM58AQ8N1B3 248 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 ZADH2Q8N4Q0 377 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 GALNT11Q8NCW6 608 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 FDCSPQ8NFU4 85 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 OR5T2Q8NGG2 359 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 IL22RA2Q969J5 263 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 SAT2Q96F10 170 aaPredicted RBP5.68□□□□□ -1.5
USP28-206ENST00000538224 KIRREL1Q96J84 757 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 OR10C1Q96KK4 312 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 ZNF75AQ96N20 296 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 TRIB1Q96RU8 372 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 ADAT1Q9BUB4 502 aaKnown RBP5.68□□□□□ -1.5
USP28-206ENST00000538224 RNF126Q9BV68 326 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 SLC5A7Q9GZV3 580 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 WDR13Q9H1Z4 485 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 MTCH1Q9NZJ7 389 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 GSKIPQ9P0R6 139 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 PCDHB10Q9UN67 800 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 TMA7Q9Y2S6 64 aaKnown RBP5.68□□□□□ -1.5
USP28-206ENST00000538224 DOCK7Q96N67 2140 aa5.68□□□□□ -1.5
USP28-206ENST00000538224 BORCS7-ASMTA0A0B4J1R7 106 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 C3orf85A0A1B0GTC6 90 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 H0YIZ8 118 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 NKX2-8O15522 239 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 ST8SIA3O43173 380 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 PHF1O43189 567 aaPredicted RBP5.67□□□□□ -1.5
USP28-206ENST00000538224 GPR137BO60478 399 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 TUSC2O75896 110 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 NGFP01138 241 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 WNT2P09544 360 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 CEACAM1P13688 526 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 CBR1P16152 277 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 IGHV1-2P23083 117 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 RPL12P30050 165 aaKnown RBP5.67□□□□□ -1.5
USP28-206ENST00000538224 KCNJ3P48549 501 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 IDH3GP51553 393 aaPredicted RBP5.67□□□□□ -1.5
USP28-206ENST00000538224 S100A12P80511 92 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 ESPL1Q14674 2120 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 BEX5Q5H9J7 111 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 SPIN3Q5JUX0 258 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 OR2T2Q6IF00 324 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 ZNF880Q6PDB4 577 aa5.67□□□□□ -1.5
USP28-206ENST00000538224 IL34Q6ZMJ4 242 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms