RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 C11orf53Q8IXP5 236 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 C10orf111Q8N326 155 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 CLDN22Q8N7P3 220 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 OR4C13Q8NGP0 309 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 SLC7A6Q92536 515 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 RORBQ92753 470 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 MAL2Q969L2 176 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 TESCQ96BS2 214 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 MRPL13Q9BYD1 178 aaKnown RBP3.98□□□□□ -1.77
CLIP1-207ENST00000536634 OR2H1Q9GZK4 316 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 ZNF702PQ9H963 129 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 MEAF6Q9HAF1 191 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 SIAEQ9HAT2 523 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 CCNB1IP1Q9NPC3 277 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 SIRT7Q9NRC8 400 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 IL20Q9NYY1 176 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 PSMC3IPQ9P2W1 217 aaPredicted RBP3.98□□□□□ -1.77
CLIP1-207ENST00000536634 RPS6KB2Q9UBS0 482 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 DUX4Q9UBX2 424 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 ZNF107Q9UII5 783 aaPredicted RBP3.98□□□□□ -1.77
CLIP1-207ENST00000536634 BTNL2Q9UIR0 455 aa3.98□□□□□ -1.77
CLIP1-207ENST00000536634 RPUSD1Q9UJJ7 312 aaKnown RBP3.98□□□□□ -1.77
CLIP1-207ENST00000536634 DNAH2Q9P225 4427 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 E9PBE3 544 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 HDAC3O15379 428 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 TPST1O60507 370 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 OR6A2O95222 327 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 IGHG1P01857 330 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 HLA-DPB1P04440 258 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 DNAH10OSP0CZ25 163 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 TROVE2P10155 538 aaKnown RBP eCLIP3.97□□□□□ -1.77
CLIP1-207ENST00000536634 LAP3P28838 519 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 SAA4P35542 130 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 ARHGDIAP52565 204 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 DSTNP60981 165 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 SLC35A2P78381 396 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 CBX3Q13185 183 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 MAB21L1Q13394 359 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 ENDOGQ14249 297 aaKnown RBP3.97□□□□□ -1.77
CLIP1-207ENST00000536634 OR1Q1Q15612 314 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 MPPED2Q15777 294 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 SGCAQ16586 387 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 RNF212Q495C1 297 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 PRAMEF6Q5VXH4 476 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 OR2T2Q6IF00 324 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 C8orf74Q6P047 294 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 ULK3Q6PHR2 472 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 ADAMTSL5Q6ZMM2 481 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 RANBP3LQ86VV4 465 aaPredicted RBP3.97□□□□□ -1.77
CLIP1-207ENST00000536634 NUDCD3Q8IVD9 361 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 C4orf33Q8N1A6 199 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 Q8N7P7 452 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 SPERTQ8NA61 448 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 BHLHE23Q8NDY6 225 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 DNAJA4Q8WW22 397 aaPredicted RBP3.97□□□□□ -1.77
CLIP1-207ENST00000536634 IFT81Q8WYA0 676 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 TNFRSF14Q92956 283 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 HAVCR1Q96D42 359 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 OR5M11Q96RB7 305 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 PANX1Q96RD7 426 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 CGREF1Q99674 301 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 TMEM43Q9BTV4 400 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 CENPHQ9H3R5 247 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 RANBP3Q9H6Z4 567 aaPredicted RBP3.97□□□□□ -1.77
CLIP1-207ENST00000536634 ELOVL3Q9HB03 270 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 INPP5EQ9NRR6 644 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 CALML5Q9NZT1 146 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 ONECUT1Q9UBC0 465 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 PAIP2BQ9ULR5 123 aaKnown RBP3.97□□□□□ -1.77
CLIP1-207ENST00000536634 PRELID1Q9Y255 219 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 STARD10Q9Y365 291 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 MAB21L2Q9Y586 359 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 ABCA13Q86UQ4 5058 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 FAT2Q9NYQ8 4349 aa3.97□□□□□ -1.77
CLIP1-207ENST00000536634 A0A1B0GVI7 797 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 A0A1B0GWJ7 208 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 LRRC30A6NM36 301 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 A8MU10 97 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 KPNA4O00629 521 aaPredicted RBP3.96□□□□□ -1.78
CLIP1-207ENST00000536634 COPEO14579 308 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 RIPK2O43353 540 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 TXNL1O43396 289 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 LYPD3O95274 346 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 PAHP00439 452 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 MT-ATP6P00846 226 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 GYPAP02724 150 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 THY1P04216 161 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 ASAH2BP0C7U1 165 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 S100A3P33764 101 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 SERPINB5P36952 375 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 HTR5AP47898 357 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 SRP9P49458 86 aaKnown RBP3.96□□□□□ -1.78
CLIP1-207ENST00000536634 RIDAP52758 137 aaKnown RBP3.96□□□□□ -1.78
CLIP1-207ENST00000536634 UGT2B15P54855 530 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 RPL18Q07020 188 aaKnown RBP3.96□□□□□ -1.78
CLIP1-207ENST00000536634 BEND6Q5SZJ8 279 aaPredicted RBP3.96□□□□□ -1.78
CLIP1-207ENST00000536634 FAM27BQ5VT28 67 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 OTPQ5XKR4 325 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 ZFAND6Q6FIF0 208 aa3.96□□□□□ -1.78
CLIP1-207ENST00000536634 C1orf94Q6P1W5 598 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms