RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, human

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD4-205	ENST00000536301	IL20	Q9NYY1	176 aa		4.01	□□□□□ -1.77
CHD4-205	ENST00000536301	ENPP5	Q9UJA9	477 aa		4.01	□□□□□ -1.77
CHD4-205	ENST00000536301	COPS3	Q9UNS2	423 aa		4.01	□□□□□ -1.77
CHD4-205	ENST00000536301	SLC7A11	Q9UPY5	501 aa		4.01	□□□□□ -1.77
CHD4-205	ENST00000536301	POLDIP2	Q9Y2S7	368 aa		4.01	□□□□□ -1.77
CHD4-205	ENST00000536301	LRRC42	Q9Y546	428 aa		4.01	□□□□□ -1.77
CHD4-205	ENST00000536301	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.01	□□□□□ -1.77
CHD4-205	ENST00000536301		A0A087X0M5	115 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	TRGV10	A0A0A0MS01	117 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	TMEM269	A0A1B0GVZ9	245 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301		A0A1B0GX30	115 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	NCBP2L	A6PVI3	153 aa	Known RBP	4	□□□□□ -1.77
CHD4-205	ENST00000536301	OOSP1	A8MZH6	123 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	C12orf77	C9JDV5	145 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301		J3QR06	171 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	TOR1A	O14656	332 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	MGST3	O14880	152 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	GSC2	O15499	205 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	EDF1	O60869	148 aa	Known RBP	4	□□□□□ -1.77
CHD4-205	ENST00000536301	SRSF10	O75494	262 aa	Known RBP	4	□□□□□ -1.77
CHD4-205	ENST00000536301	DHRS3	O75911	302 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	NPPA	P01160	153 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	CGB3	P0DN86	165 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	CGB7	P0DN87	165 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	SNRPB	P14678	240 aa	Known RBP	4	□□□□□ -1.77
CHD4-205	ENST00000536301	ALOX5AP	P20292	161 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	ERP29	P30040	261 aa	Known RBP	4	□□□□□ -1.77
CHD4-205	ENST00000536301	PPIF	P30405	207 aa	Known RBP	4	□□□□□ -1.77
CHD4-205	ENST00000536301	CEACAM3	P40198	252 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	GNG10	P50151	68 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	ARHGDIB	P52566	201 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	F2RL1	P55085	397 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	RUNX1	Q01196	453 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	EWSR1	Q01844	656 aa	Known RBP eCLIP	4	□□□□□ -1.77
CHD4-205	ENST00000536301	TMED1	Q13445	227 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	PMS2P11	Q13670	270 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	EBI3	Q14213	229 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	UBE2V2	Q15819	145 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	CLVS2	Q5SYC1	327 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	GLYAT	Q6IB77	296 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	OR52W1	Q6IF63	320 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	CGB2	Q6NT52	195 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	CCDC144NL	Q6NUI1	221 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	ACSM6	Q6P461	480 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	RASSF6	Q6ZTQ3	369 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	SLC25A26	Q70HW3	274 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	TGIF2LX	Q8IUE1	241 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	BBS1	Q8NFJ9	593 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	OR6Q1	Q8NGQ2	317 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	OR9G1	Q8NH87	305 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	CORO2A	Q92828	525 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	MNT	Q99583	582 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	PKIB	Q9C010	78 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	DCAF13	Q9NV06	445 aa	Known RBP	4	□□□□□ -1.77
CHD4-205	ENST00000536301	INTS9	Q9NV88	658 aa	Known RBP	4	□□□□□ -1.77
CHD4-205	ENST00000536301	NDUFA13	Q9P0J0	144 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	PSG11	Q9UQ72	335 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	ARL2BP	Q9Y2Y0	163 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	WSB1	Q9Y6I7	421 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301		V9GYS6	101 aa		4	□□□□□ -1.77
CHD4-205	ENST00000536301	TRAV39	A0A0B4J263	110 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	IGKV1-12	A0A0C4DH73	117 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	ODAM	A1E959	279 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	IZUMO1R	A6ND01	250 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	DLGAP1	O14490	977 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	SLC25A17	O43808	307 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	SOX15	O60248	233 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	OR2H2	O95918	312 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	IGKV1D-12	P01611	117 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	IFNA6	P05013	189 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	MRPL3	P09001	348 aa	Known RBP	3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	SLC2A2	P11168	524 aa	Predicted RBP	3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	ATP6V1B1	P15313	513 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	PRKACA	P17612	351 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	CALB2	P22676	271 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	PTGFR	P43088	359 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	PRRX1	P54821	245 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	BNIP1	Q12981	228 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	KPNB1	Q14974	876 aa	Known RBP	3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	ATXN7L3	Q14CW9	347 aa	Predicted RBP	3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	SLX4IP	Q5VYV7	408 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	RNLS	Q5VYX0	342 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	METTL21C	Q5VZV1	264 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	LINC00322	Q6ZN03	302 aa	Predicted RBP	3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	TMEM179B	Q7Z7N9	219 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	MOB3B	Q86TA1	216 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	SATL1	Q86VE3	508 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	LYPD6	Q86Y78	171 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	SGPP2	Q8IWX5	399 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	OR8H3	Q8N146	312 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	ARHGAP24	Q8N264	748 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	AQP11	Q8NBQ7	271 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	OR13A1	Q8NGR1	328 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	RFESD	Q8TAC1	157 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	UBALD1	Q8TB05	177 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	RFT1	Q96AA3	541 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	PYURF	Q96I23	114 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	UBE2E2	Q96LR5	201 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	S1PR3	Q99500	378 aa		3.99	□□□□□ -1.77
CHD4-205	ENST00000536301	KCTD14	Q9BQ13	255 aa	Predicted RBP	3.99	□□□□□ -1.77

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