RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SLC25A17O43808 307 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 PRKNO60260 465 aaPredicted RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 PDGFBP01127 241 aaPredicted RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 PFN1P07737 140 aaKnown RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 COL8A2P25067 703 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 MC5RP33032 325 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 PTGER4P35408 488 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ARRB1P49407 418 aaPredicted RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 RHOAP61586 193 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 HIST1H3AP68431 136 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 CDK3Q00526 305 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 PNRC1Q12796 327 aaPredicted RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 DECR1Q16698 335 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 CEACAM21Q3KPI0 293 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 CLLU1OSQ5K130 101 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 GPR157Q5UAW9 335 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 TEX43Q6ZNM6 134 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 COX15Q7KZN9 410 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 SGPP2Q8IWX5 399 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 OR52L2PQ8NGH6 319 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 WFDC5Q8TCV5 224 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 GATAD1Q8WUU5 269 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 OR5P2Q8WZ92 322 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 PSMF1Q92530 271 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 NEUROG1Q92886 237 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 MOB3AQ96BX8 217 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 CUTCQ9NTM9 273 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 MARCH2Q9P0N8 246 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 SERGEFQ9UGK8 458 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 SS18L2Q9UHA2 77 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 B3GALT1Q9Y5Z6 326 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ZNF780BQ9Y6R6 833 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 MYO16Q9Y6X6 1858 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 B4DEV8 164 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 CORTO00230 105 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 TM4SF5O14894 197 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 EIF4EBP3O60516 100 aaPredicted RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 SPINK4O60575 86 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 SERF1AO75920 110 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 SFT2D2O95562 160 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 CDS2O95674 445 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 IFNA21P01568 189 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 DEFA4P12838 97 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ZNF20P17024 532 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 AZU1P20160 251 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 OTX1P32242 354 aaPredicted RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 OTX2P32243 289 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ADMP35318 185 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 FRKP42685 505 aaPredicted RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 ZNF136P52737 540 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ARF3P61204 181 aaPredicted RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 CSNK1G2P78368 415 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ARF1P84077 181 aaKnown RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 POU3F1Q03052 451 aaPredicted RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 TNP2Q05952 138 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 TESK1Q15569 626 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 OR1Q1Q15612 314 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ACKR1Q16570 336 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 TMEM128Q5BJH2 165 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 TRIM61Q5EBN2 209 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 WDR38Q5JTN6 314 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ZNF841Q6ZN19 808 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 C1orf122Q6ZSJ8 110 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 LYZL2Q7Z4W2 148 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 NRSN1Q8IZ57 195 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 H1FOOQ8IZA3 346 aaPredicted RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 OR8I2Q8N0Y5 310 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 FAM19A2Q8N3H0 131 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 OR2Z1Q8NG97 314 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 OR56A1Q8NGH5 318 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 CMTM2Q8TAZ6 248 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ADAMTS15Q8TE58 950 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 TMEM170AQ8WVE7 144 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ARRDC3Q96B67 414 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 GABRG3Q99928 467 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 PRRT1Q99946 306 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 PARLQ9H300 379 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 BANF2Q9H503 90 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 OBSL1O75147 1896 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 LAMA1P25391 3075 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 TRBV24-1A0A075B6N3 115 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 PPIAL4EA0A075B759 164 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 TRAV8-6A0A0B4J262 113 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 PPIAL4CA0A0B4J2A2 164 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 FBLL1A6NHQ2 334 aaKnown RBP3.23□□□□□ -1.89
MCF2-210ENST00000536274 CEBPZOSA8MTT3 80 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 ADARB2-AS1A8MUL3 147 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 C4orf51C9J302 202 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 PPIAL4DF5H284 164 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 H3BP45 60 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 P2RX6O15547 441 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 DEDDO75618 318 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 RAD51DO75771 328 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 DBIP07108 87 aaKnown RBP3.23□□□□□ -1.89
MCF2-210ENST00000536274 RHOCP08134 193 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 CELA3BP08861 270 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 PPIAL4FP0DN26 164 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 IGLC2P0DOY2 106 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 IGLC3P0DOY3 106 aa3.23□□□□□ -1.89
MCF2-210ENST00000536274 LYL1P12980 280 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms