RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 H1FNTQ75WM6 255 aaPredicted RBP12.18□□□□□ -0.46
LIG1-203ENST00000536218 TMEM123Q8N131 208 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 OR2G3Q8NGZ4 309 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 TMEM18Q96B42 140 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 CNTD2Q9H8S5 307 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 FOXJ2Q9P0K8 574 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 BDP1A6H8Y1 2624 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 ADAMTS20P59510 1910 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 IGKV1D-43A0A0B4J1Z2 117 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 AMY2BP19961 511 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 WNT5AP41221 380 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 P2RY1P47900 373 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 MRPL14Q6P1L8 145 aaKnown RBP12.18□□□□□ -0.46
LIG1-203ENST00000536218 OR10A7Q8NGE5 316 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 ST8SIA1Q92185 356 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 NICN1Q9BSH3 213 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 CENPMQ9NSP4 180 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 FKBP11Q9NYL4 201 aa12.18□□□□□ -0.46
LIG1-203ENST00000536218 B4E171 279 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 CER1O95813 267 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 GLI4P10075 376 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 TNFSF10P50591 281 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 RPL23AP62750 156 aaKnown RBP12.17□□□□□ -0.46
LIG1-203ENST00000536218 SLC18B1Q6NT16 456 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 MRPL24Q96A35 216 aaKnown RBP12.17□□□□□ -0.46
LIG1-203ENST00000536218 DDIT4LQ96D03 193 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 AK3Q9UIJ7 227 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 POLR3KQ9Y2Y1 108 aaPredicted RBP12.17□□□□□ -0.46
LIG1-203ENST00000536218 IGLV1-36A0A0B4J1U3 117 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 TMEM210A6NLX4 147 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 LMO1P25800 156 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 BRS3P32247 399 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 ARFRP1Q13795 201 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 SLC17A1Q14916 467 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 PCK2Q16822 640 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 TMEM176BQ3YBM2 270 aaPredicted RBP12.17□□□□□ -0.46
LIG1-203ENST00000536218 CARD17Q5XLA6 110 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 ZNF100Q8IYN0 542 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 THRSPQ92748 146 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 ABHD6Q9BV23 337 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 CHST11Q9NPF2 352 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 SERINC1Q9NRX5 453 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 LAMP3Q9UQV4 416 aa12.17□□□□□ -0.46
LIG1-203ENST00000536218 CBY3A6NI87 242 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 HPRT1P00492 218 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 ZNF823P16415 610 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 BIDP55957 195 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 MYBPHQ13203 477 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 UNC119Q13432 240 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 C1orf194Q5T5A4 169 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 SPACA9Q96E40 222 aaPredicted RBP12.16□□□□□ -0.46
LIG1-203ENST00000536218 SPACA5Q96QH8 159 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 GINS3Q9BRX5 216 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 TTC28Q96AY4 2481 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 CHD3Q12873 2000 aaKnown RBP12.16□□□□□ -0.46
LIG1-203ENST00000536218 AQP7O14520 342 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 CDC14BO60729 498 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 FPR2P25090 351 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 RPS18P62269 152 aaKnown RBP12.16□□□□□ -0.46
LIG1-203ENST00000536218 HSF1Q00613 529 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 IL11RAQ14626 422 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 SLC16A14Q7RTX9 510 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 DCXRQ7Z4W1 244 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 RHBDD1Q8TEB9 315 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 RCC1LQ96I51 464 aaKnown RBP12.16□□□□□ -0.46
LIG1-203ENST00000536218 SCGB3A2Q96PL1 93 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 OR8B4Q96RC9 309 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 C1orf123Q9NWV4 160 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 OMGP23515 440 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 CFPP27918 469 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 PTGDSP41222 190 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 DUSP3P51452 185 aaPredicted RBP12.16□□□□□ -0.46
LIG1-203ENST00000536218 UCP3P55916 312 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 DTWD2Q8NBA8 298 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 OR13G1Q8NGZ3 307 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 REEP6Q96HR9 211 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 ZPBPQ9BS86 351 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 EHFQ9NZC4 300 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 B3GALT1Q9Y5Z6 326 aa12.16□□□□□ -0.46
LIG1-203ENST00000536218 EML6Q6ZMW3 1958 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 MEGF11A6BM72 1044 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 K7N7A8 449 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 UMODP07911 640 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 CHRM2P08172 466 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 CEACAM8P31997 349 aaPredicted RBP12.15□□□□□ -0.46
LIG1-203ENST00000536218 ICAM4Q14773 271 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 PCOLCEQ15113 449 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 SDSLQ96GA7 329 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 ARRDC1-AS1Q9H2J1 176 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 C14orf166Q9Y224 244 aaKnown RBP12.15□□□□□ -0.46
LIG1-203ENST00000536218 EMC9Q9Y3B6 208 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 PPIAL4AQ9Y536 164 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 C20orf202A1L168 122 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 CD55P08174 381 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 SUCLG1P53597 346 aaKnown RBP12.15□□□□□ -0.46
LIG1-203ENST00000536218 PTTG1IPP53801 180 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 ERVS71-1P61550 626 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 PLPPR5Q32ZL2 321 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 CDCP2Q5VXM1 449 aa12.15□□□□□ -0.46
LIG1-203ENST00000536218 FBXW9Q5XUX1 488 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms