RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 HIST1H2BKO60814 126 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 CER1O95813 267 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 CYB5R3P00387 301 aaPredicted RBP5.71□□□□□ -1.5
USP28-202ENST00000535607 PDGFBP01127 241 aaPredicted RBP5.71□□□□□ -1.5
USP28-202ENST00000535607 HIST1H2BJP06899 126 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 GIMD1P0DJR0 217 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 MMP9P14780 707 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 DAOP14920 347 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 HIST1H2BOP23527 126 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 HIST1H2BBP33778 126 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 THBS4P35443 961 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 HIST1H2BDP58876 126 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 LSM6P62312 80 aaKnown RBP5.71□□□□□ -1.5
USP28-202ENST00000535607 HIST1H2BCP62807 126 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 VAMP2P63027 116 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 QRFPP83859 136 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 PSG6Q00889 435 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 BAXQ07812 192 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 OR8G1Q15617 311 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 HIST2H2BEQ16778 126 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 ACOT6Q3I5F7 207 aaPredicted RBP5.71□□□□□ -1.5
USP28-202ENST00000535607 ZNF506Q5JVG8 444 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.71□□□□□ -1.5
USP28-202ENST00000535607 C1orf140Q5VVS0 124 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 SPNS3Q6ZMD2 512 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 TGIF2LYQ8IUE0 185 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 FAM185AQ8N0U4 392 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 CA13Q8N1Q1 262 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 GVQW1Q8N7I0 195 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 BCORP1Q8N888 145 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 TMEM105Q8N8V8 129 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 LRTM2Q8N967 370 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 OR10A7Q8NGE5 316 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 OR4D6Q8NGJ1 314 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 OR51A2Q8NGJ7 313 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 OR2G3Q8NGZ4 309 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 OR51F2Q8NH61 342 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 DNASE2BQ8WZ79 361 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 HIST1H2BHQ93079 126 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 TMEM230Q96A57 120 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 MRGPRFQ96AM1 343 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 C8orf44Q96CB5 159 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 WDYHV1Q96HA8 205 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 VSTM2LQ96N03 204 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 OR5B12Q96R08 314 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 OR2A5Q96R48 311 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 GPER1Q99527 375 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 P2RX4Q99571 388 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 HIST1H2BNQ99877 126 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 HIST1H2BMQ99879 126 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 RTBDNQ9BSG5 229 aaPredicted RBP5.71□□□□□ -1.5
USP28-202ENST00000535607 DDA1Q9BW61 102 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 ANGPTL4Q9BY76 406 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 GPR61Q9BZJ8 451 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 HIPK2Q9H2X6 1198 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 KCNK15Q9H427 330 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 PISDQ9UG56 409 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 WSB1Q9Y6I7 421 aa5.71□□□□□ -1.5
USP28-202ENST00000535607 TRBV24-1A0A075B6N3 115 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 CCDC187A0A096LP49 1063 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 IGLV1-36A0A0B4J1U3 117 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.7□□□□□ -1.5
USP28-202ENST00000535607 LNP1A1A4G5 178 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 CRYM-AS1A6NIL9 109 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 NPIPB13A6NJU9 1138 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 TRDCB7Z8K6 153 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 NPIPB4C9JG80 1138 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 PHOX2AO14813 284 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 PITX3O75364 302 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 AHSA1O95433 338 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 NSA2O95478 260 aaKnown RBP5.7□□□□□ -1.5
USP28-202ENST00000535607 CDS2O95674 445 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 TK1P04183 234 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 HCKP08631 526 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 SRP19P09132 144 aaKnown RBP5.7□□□□□ -1.5
USP28-202ENST00000535607 TRGC1P0CF51 173 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 NR2C1P13056 603 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 IL2RGP31785 369 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 BLKP51451 505 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 RND2P52198 227 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 POLR2HP52434 150 aaKnown RBP5.7□□□□□ -1.5
USP28-202ENST00000535607 SNU13P55769 128 aaKnown RBP5.7□□□□□ -1.5
USP28-202ENST00000535607 DCAF7P61962 342 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 RPL23AP62750 156 aaKnown RBP5.7□□□□□ -1.5
USP28-202ENST00000535607 SUPT4H1P63272 117 aaKnown RBP5.7□□□□□ -1.5
USP28-202ENST00000535607 HOXA4Q00056 320 aaPredicted RBP5.7□□□□□ -1.5
USP28-202ENST00000535607 ID2Q02363 134 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 TNFRSF9Q07011 255 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 LYSMD4Q5XG99 296 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 PMS2CLQ68D20 193 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 GLIPR1L1Q6UWM5 242 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 BTNL3Q6UXE8 466 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 FBXW12Q6X9E4 464 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 TMEM182Q6ZP80 229 aaPredicted RBP5.7□□□□□ -1.5
USP28-202ENST00000535607 COX15Q7KZN9 410 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 FAM219AQ8IW50 185 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 APCDD1LQ8NCL9 501 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 OR52L2PQ8NGH6 319 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 OR2AJ1Q8NGZ0 328 aa5.7□□□□□ -1.5
USP28-202ENST00000535607 OR13G1Q8NGZ3 307 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms