RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 ICAM4Q14773 271 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 MPV17LQ2QL34 196 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 HIKESHIQ53FT3 197 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 CALHM1Q8IU99 346 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 ODF3L1Q8IXM7 274 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 TMEM252Q8N6L7 170 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 PIGCQ92535 297 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 ALKBH3Q96Q83 286 aaPredicted RBP11.59□□□□□ -0.55
HDAC4-214ENST00000535493 SUCNR1Q9BXA5 334 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 ZFP92A6NM28 416 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 WRBO00258 174 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 TERTO14746 1132 aaKnown RBP11.58□□□□□ -0.56
HDAC4-214ENST00000535493 DHHO43323 396 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 PPYP01298 95 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 CD27P26842 260 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 GNRHRP30968 328 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 RPL23AP62750 156 aaKnown RBP11.58□□□□□ -0.56
HDAC4-214ENST00000535493 SHBQ15464 509 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 CLEC12BQ2HXU8 276 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 OR2T2Q6IF00 324 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 ZNF880Q6PDB4 577 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 FBXO46Q6PJ61 603 aaPredicted RBP11.58□□□□□ -0.56
HDAC4-214ENST00000535493 TBC1D26Q86UD7 250 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 ZNF695Q8IW36 515 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 ABHD5Q8WTS1 349 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 FRZBQ92765 325 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 SSX3Q99909 188 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 ULBP2Q9BZM5 246 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 TREM2Q9NZC2 230 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 GNG13Q9P2W3 67 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 IL36RNQ9UBH0 155 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 PISDQ9UG56 409 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 EXPH5Q8NEV8 1989 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 MPPED1O15442 326 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 PIAS2O75928 621 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 IGHV3-9P01782 118 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 ECI1P42126 302 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 RBP2P50120 134 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 RAB11AP62491 216 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 RAB1AP62820 205 aa11.58□□□□□ -0.56
HDAC4-214ENST00000535493 DMRTC2Q8IXT2 367 aaPredicted RBP11.58□□□□□ -0.56
HDAC4-214ENST00000535493 TNFSF11O14788 317 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 CHST1O43916 411 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 SCAF4O95104 1147 aaKnown RBP11.57□□□□□ -0.56
HDAC4-214ENST00000535493 TRGC1P0CF51 173 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 MMP9P14780 707 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 KCNMB1Q16558 191 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 ZNF818PQ6ZRF7 136 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 OSR2Q8N2R0 312 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 FGFBP3Q8TAT2 258 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 C14orf144Q96I85 54 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 SYT3Q9BQG1 590 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 NIPSNAP3BQ9BS92 247 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 DEFB126Q9BYW3 111 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 CALHM2Q9HA72 323 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 CRLF2Q9HC73 371 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 IGKV1D-13A0A0B4J2D9 117 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 YKT6O15498 198 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 NRASP01111 189 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 IGLV3-19P01714 112 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 SCTP09683 121 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 IGKV1-13P0DP09 117 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 RPS18P62269 152 aaKnown RBP11.57□□□□□ -0.56
HDAC4-214ENST00000535493 LSM6P62312 80 aaKnown RBP11.57□□□□□ -0.56
HDAC4-214ENST00000535493 C1QL4Q86Z23 238 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 GAPTQ8N292 157 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 MOB3AQ96BX8 217 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 SNX22Q96L94 193 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 VSIRQ9H7M9 311 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 ZNF286AQ9HBT8 521 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 MTCH2Q9Y6C9 303 aa11.57□□□□□ -0.56
HDAC4-214ENST00000535493 CHD3Q12873 2000 aaKnown RBP11.56□□□□□ -0.56
HDAC4-214ENST00000535493 SCRG1O75711 98 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 CTSSP25774 331 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 VAMP2P63027 116 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 ARL6IP1Q15041 203 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 RHBDD2Q6NTF9 364 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 LCN15Q6UWW0 184 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 THNSL2Q86YJ6 484 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 CMTM1Q8IZ96 169 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 SPTSSAQ969W0 71 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 RSG1Q9BU20 258 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 CHRNA10Q9GZZ6 450 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 A0A1W2PR80 420 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 ZNF587BE7ETH6 402 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 ETV2O00321 342 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-214ENST00000535493 PPP1R2P9O14990 202 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 GATCO43716 136 aaKnown RBP11.56□□□□□ -0.56
HDAC4-214ENST00000535493 ZFAND5O76080 213 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 F10P00742 488 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 PGA5P0DJD9 388 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 NKX6-1P78426 367 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-214ENST00000535493 ZNF92Q03936 586 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 TMEM267Q0VDI3 215 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-214ENST00000535493 ZNF266Q14584 549 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 SLC25A26Q70HW3 274 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 SPACA9Q96E40 222 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-214ENST00000535493 FOXD3Q9UJU5 478 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-214ENST00000535493 TMED3Q9Y3Q3 217 aa11.56□□□□□ -0.56
HDAC4-214ENST00000535493 CACNA1DQ01668 2161 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms