RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 NABP1Q96AH0 204 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 APH1AQ96BI3 265 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 CXorf40BQ96DE9 158 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 SFRP2Q96HF1 295 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 S100A13Q99584 98 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 MARVELD1Q9BSK0 173 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 C1QTNF6Q9BXI9 259 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 MED28Q9H204 178 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 ABCG5Q9H222 651 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 PRO1933Q9H354 126 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 C1orf198Q9H425 327 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 GLIPR2Q9H4G4 154 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 DHX35Q9H5Z1 703 aaKnown RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 TUBA4BQ9H853 241 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 HRASLSQ9HDD0 168 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 UBQLN1Q9UMX0 589 aaKnown RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 PYGO1Q9Y3Y4 419 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 TSSC4Q9Y5U2 329 aaPredicted RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 ARL5AQ9Y689 179 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 HTTP42858 3142 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 GBF1Q92538 1859 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 CDK5RAP2Q96SN8 1893 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 RANBP2P49792 3224 aaKnown RBP2.85□□□□□ -1.95
CSMD3-210ENST00000534172 ROBO3Q96MS0 1386 aa2.85□□□□□ -1.95
CSMD3-210ENST00000534172 NSG1A0A0A6YYJ2 146 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 TRBV9A0A0B4J1U6 114 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 TRBV7-9A0A0J9YWB2 115 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 OR11H12B2RN74 326 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 C11orf98E9PRG8 122 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 GOSR2O14653 212 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 XRCC2O43543 280 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 ADAP1O75689 374 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 C1orf105O95561 183 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 CFDP00746 253 aaPredicted RBP2.84□□□□□ -1.95
CSMD3-210ENST00000534172 CGAP01215 116 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 C1QCP02747 245 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 TCRBP04435 133 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 FCGR3AP08637 254 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 SMIM10L1P0DMW3 83 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 FOLR1P15328 257 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 NSG1P42857 185 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 CX3CR1P49238 355 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 PPOXP50336 477 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 NCS1P62166 190 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 PTGES3Q15185 160 aaKnown RBP2.84□□□□□ -1.95
CSMD3-210ENST00000534172 OCIAD2Q56VL3 154 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 MESTQ5EB52 335 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 MUC21Q5SSG8 566 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 FAM182AQ5T1J6 154 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 OR2G6Q5TZ20 316 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 FAM71E1Q6IPT2 247 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF613Q6PF04 617 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF621Q6ZSS3 439 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 LINC01551Q86U37 167 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 FUNDC1Q8IVP5 155 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 CBR4Q8N4T8 237 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 KIR3DL3Q8N743 410 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 SUMF1Q8NBK3 374 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 OR11H1Q8NG94 326 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 OR4E2Q8NGC2 313 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 OR56A4Q8NGH8 313 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 OR13C8Q8NGS7 320 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 OR11H2Q8NH07 326 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 OR4S2Q8NH73 311 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 OR1S1Q8NH92 325 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 ZNF519Q8TB69 540 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 ISOC2Q96AB3 205 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 ANKRD9Q96BM1 317 aaPredicted RBP2.84□□□□□ -1.95
CSMD3-210ENST00000534172 RPUSD4Q96CM3 377 aaKnown RBP2.84□□□□□ -1.95
CSMD3-210ENST00000534172 CENPNQ96H22 339 aaPredicted RBP2.84□□□□□ -1.95
CSMD3-210ENST00000534172 SMIM10Q96HG1 83 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 SULT4A1Q9BR01 284 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 RIOK2Q9BVS4 552 aaKnown RBP2.84□□□□□ -1.95
CSMD3-210ENST00000534172 ELL3Q9HB65 397 aaPredicted RBP2.84□□□□□ -1.95
CSMD3-210ENST00000534172 RBFOX1Q9NWB1 397 aaKnown RBP2.84□□□□□ -1.95
CSMD3-210ENST00000534172 CACNG5Q9UF02 275 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 CD84Q9UIB8 345 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 SAMD4AQ9UPU9 718 aaKnown RBP2.84□□□□□ -1.95
CSMD3-210ENST00000534172 SCML2Q9UQR0 700 aa2.84□□□□□ -1.95
CSMD3-210ENST00000534172 MKI67P46013 3256 aaKnown RBP2.84□□□□□ -1.95
CSMD3-210ENST00000534172 A0A087WUJ7 227 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 A0A087X002 238 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 TGIF2-C20orf24A0A0A6YYL0 155 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 A0A1W2PRD5 423 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 H3BN98 237 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 TRAPPC2LH3BP13 241 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 SIRPB1O00241 398 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 GPR31O00270 319 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 HSBP1O75506 76 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 HLA-HP01893 362 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 HLA-DQB1P01920 261 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 BPGMP07738 259 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 WNT2P09544 360 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 UCHL1P09936 223 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 ABOP16442 354 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 PSMB5P28074 263 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 HTR2CP28335 458 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 AQP2P41181 271 aa2.84□□□□□ -1.96
CSMD3-210ENST00000534172 RPS9P46781 194 aaKnown RBP2.84□□□□□ -1.96
CSMD3-210ENST00000534172 CRISP1P54107 249 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms