RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 OR4D6Q8NGJ1 314 aa16.88■□□□□ 0.29
SSH3-211ENST00000534112 UTP4Q969X6 686 aaKnown RBP16.88■□□□□ 0.29
SSH3-211ENST00000534112 ADAT3Q96EY9 351 aaPredicted RBP16.88■□□□□ 0.29
SSH3-211ENST00000534112 A0A087X0M5 115 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 A0A1B0GX30 115 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 ODAMA1E959 279 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 FAM90A18PA6NE21 464 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 FAM90A16PA6NEW6 464 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 FAM90A20PA6NIJ5 464 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 FAM90A9PA6NNJ1 464 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 ZAR1LA6NP61 321 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 FAM90A12PA8MX19 464 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 FAM90A5PA8MXJ8 464 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 FAM90A15PP0C7V4 464 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 FAM90A13PP0C7W8 464 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 FAM90A14PP0C7W9 464 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 FAM90A24PP0C7X0 464 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 PRKACBP22694 351 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 LMO1P25800 156 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 MYCNOSP40205 109 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 PTGFRP43088 359 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 C12orf73Q69YU5 71 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 THNSL2Q86YJ6 484 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 NOL4LQ96MY1 436 aaPredicted RBP16.87■□□□□ 0.29
SSH3-211ENST00000534112 ZFP57Q9NU63 452 aa16.87■□□□□ 0.29
SSH3-211ENST00000534112 ZMAT5Q9UDW3 170 aaKnown RBP16.87■□□□□ 0.29
SSH3-211ENST00000534112 WARS2Q9UGM6 360 aaKnown RBP16.87■□□□□ 0.29
SSH3-211ENST00000534112 IGKV1-12A0A0C4DH73 117 aa16.86■□□□□ 0.29
SSH3-211ENST00000534112 APOL3O95236 402 aa16.86■□□□□ 0.29
SSH3-211ENST00000534112 IGKV1D-12P01611 117 aa16.86■□□□□ 0.29
SSH3-211ENST00000534112 NHLRC4P0CG21 123 aaPredicted RBP16.86■□□□□ 0.29
SSH3-211ENST00000534112 UBCP0CG48 685 aaKnown RBP16.86■□□□□ 0.29
SSH3-211ENST00000534112 ATF1P18846 271 aa16.86■□□□□ 0.29
SSH3-211ENST00000534112 SLC6A1P30531 599 aa16.86■□□□□ 0.29
SSH3-211ENST00000534112 DGCR2P98153 550 aa16.86■□□□□ 0.29
SSH3-211ENST00000534112 C1orf146Q5VVC0 180 aa16.86■□□□□ 0.29
SSH3-211ENST00000534112 LHFPL2Q6ZUX7 228 aa16.86■□□□□ 0.29
SSH3-211ENST00000534112 OR10H4Q8NGA5 316 aa16.86■□□□□ 0.29
SSH3-211ENST00000534112 CHPT1Q8WUD6 406 aa16.86■□□□□ 0.29
SSH3-211ENST00000534112 P2RX4Q99571 388 aa16.86■□□□□ 0.29
SSH3-211ENST00000534112 KRT84Q9NSB2 600 aa16.86■□□□□ 0.29
SSH3-211ENST00000534112 ING3Q9NXR8 418 aa16.86■□□□□ 0.29
SSH3-211ENST00000534112 NUDT19A8MXV4 375 aa16.85■□□□□ 0.29
SSH3-211ENST00000534112 SNRNP70P08621 437 aaKnown RBP16.85■□□□□ 0.29
SSH3-211ENST00000534112 KIR3DL2P43630 455 aa16.85■□□□□ 0.29
SSH3-211ENST00000534112 SCN1BQ07699 218 aa16.85■□□□□ 0.29
SSH3-211ENST00000534112 C17orf58Q2M2W7 97 aa16.85■□□□□ 0.29
SSH3-211ENST00000534112 KRBOX4Q5JUW0 171 aa16.85■□□□□ 0.29
SSH3-211ENST00000534112 UTS2BQ765I0 119 aa16.85■□□□□ 0.29
SSH3-211ENST00000534112 TFAP2CQ92754 450 aa16.85■□□□□ 0.29
SSH3-211ENST00000534112 RFT1Q96AA3 541 aa16.85■□□□□ 0.29
SSH3-211ENST00000534112 RPEQ96AT9 228 aa16.85■□□□□ 0.29
SSH3-211ENST00000534112 FGGYQ96C11 551 aa16.85■□□□□ 0.29
SSH3-211ENST00000534112 COQ2Q96H96 371 aa16.85■□□□□ 0.29
SSH3-211ENST00000534112 COMMD4Q9H0A8 199 aa16.85■□□□□ 0.29
SSH3-211ENST00000534112 U3KQK5 164 aa16.85■□□□□ 0.29
SSH3-211ENST00000534112 H0YHG0 523 aa16.84■□□□□ 0.29
SSH3-211ENST00000534112 CIB2O75838 187 aa16.84■□□□□ 0.29
SSH3-211ENST00000534112 CSN2P05814 226 aa16.84■□□□□ 0.29
SSH3-211ENST00000534112 ZNF44P15621 663 aa16.84■□□□□ 0.29
SSH3-211ENST00000534112 NFYBP25208 207 aa16.84■□□□□ 0.29
SSH3-211ENST00000534112 HTR1FP30939 366 aa16.84■□□□□ 0.29
SSH3-211ENST00000534112 C5orf56Q8N8D9 126 aa16.84■□□□□ 0.29
SSH3-211ENST00000534112 KLHL30-AS1Q8NEE0 82 aa16.84■□□□□ 0.29
SSH3-211ENST00000534112 OR56B4Q8NH76 319 aa16.84■□□□□ 0.29
SSH3-211ENST00000534112 OR9G1Q8NH87 305 aa16.84■□□□□ 0.29
SSH3-211ENST00000534112 TOMM40LQ969M1 308 aa16.84■□□□□ 0.29
SSH3-211ENST00000534112 RNF166Q96A37 237 aaPredicted RBP16.84■□□□□ 0.29
SSH3-211ENST00000534112 SPSB1Q96BD6 273 aa16.84■□□□□ 0.29
SSH3-211ENST00000534112 OPALINQ96PE5 141 aa16.84■□□□□ 0.29
SSH3-211ENST00000534112 PCDHB16Q9NRJ7 776 aa16.84■□□□□ 0.29
SSH3-211ENST00000534112 ZNF729A6NN14 1252 aaPredicted RBP16.83■□□□□ 0.28
SSH3-211ENST00000534112 SERPINE3A8MV23 424 aa16.83■□□□□ 0.28
SSH3-211ENST00000534112 KDM4BO94953 1096 aa16.83■□□□□ 0.28
SSH3-211ENST00000534112 ISL1P61371 349 aa16.83■□□□□ 0.28
SSH3-211ENST00000534112 Q6P435 159 aa16.83■□□□□ 0.28
SSH3-211ENST00000534112 DRAM1Q8N682 238 aa16.83■□□□□ 0.28
SSH3-211ENST00000534112 CHST4Q8NCG5 386 aa16.83■□□□□ 0.28
SSH3-211ENST00000534112 KIRREL1Q96J84 757 aa16.83■□□□□ 0.28
SSH3-211ENST00000534112 LINC00527Q9UJ94 153 aa16.83■□□□□ 0.28
SSH3-211ENST00000534112 GNG8Q9UK08 70 aa16.83■□□□□ 0.28
SSH3-211ENST00000534112 KBTBD11-OT1A0A1B0GTJ5 212 aa16.82■□□□□ 0.28
SSH3-211ENST00000534112 SLC33A1O00400 549 aaPredicted RBP16.82■□□□□ 0.28
SSH3-211ENST00000534112 CGB3P0DN86 165 aa16.82■□□□□ 0.28
SSH3-211ENST00000534112 CGB7P0DN87 165 aa16.82■□□□□ 0.28
SSH3-211ENST00000534112 ZNF20P17024 532 aa16.82■□□□□ 0.28
SSH3-211ENST00000534112 ATP6V1E1P36543 226 aa16.82■□□□□ 0.28
SSH3-211ENST00000534112 HES1Q14469 280 aa16.82■□□□□ 0.28
SSH3-211ENST00000534112 ATXN7L3Q14CW9 347 aaPredicted RBP16.82■□□□□ 0.28
SSH3-211ENST00000534112 TP53I3Q53FA7 332 aa16.82■□□□□ 0.28
SSH3-211ENST00000534112 TMEM244Q5VVB8 128 aa16.82■□□□□ 0.28
SSH3-211ENST00000534112 ZNF695Q8IW36 515 aa16.82■□□□□ 0.28
SSH3-211ENST00000534112 DUX3Q96PT4 197 aa16.82■□□□□ 0.28
SSH3-211ENST00000534112 SPACA5Q96QH8 159 aa16.82■□□□□ 0.28
SSH3-211ENST00000534112 PPIL3Q9H2H8 161 aaKnown RBP16.82■□□□□ 0.28
SSH3-211ENST00000534112 OR6C3Q9NZP0 311 aa16.82■□□□□ 0.28
SSH3-211ENST00000534112 AMMECR1Q9Y4X0 333 aaPredicted RBP16.82■□□□□ 0.28
SSH3-211ENST00000534112 STAB2Q8WWQ8 2551 aa16.81■□□□□ 0.28
SSH3-211ENST00000534112 J3QR06 171 aa16.81■□□□□ 0.28
SSH3-211ENST00000534112 DEGS1O15121 323 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms