RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 GBX2P52951 348 aaPredicted RBP7.74□□□□□ -1.17
SSBP3-215ENST00000533946 LTC4SQ16873 150 aa7.74□□□□□ -1.17
SSBP3-215ENST00000533946 FAM27D1Q5T7N8 215 aa7.74□□□□□ -1.17
SSBP3-215ENST00000533946 OGFRL1Q5TC84 451 aaPredicted RBP7.74□□□□□ -1.17
SSBP3-215ENST00000533946 DMKNQ6E0U4 476 aaPredicted RBP7.74□□□□□ -1.17
SSBP3-215ENST00000533946 GDPGP1Q6ZNW5 385 aa7.74□□□□□ -1.17
SSBP3-215ENST00000533946 RFESDQ8TAC1 157 aa7.74□□□□□ -1.17
SSBP3-215ENST00000533946 TNFAIP8L1Q8WVP5 186 aa7.74□□□□□ -1.17
SSBP3-215ENST00000533946 GHSRQ92847 366 aa7.74□□□□□ -1.17
SSBP3-215ENST00000533946 ITFG2Q969R8 447 aa7.74□□□□□ -1.17
SSBP3-215ENST00000533946 SPSB1Q96BD6 273 aa7.74□□□□□ -1.17
SSBP3-215ENST00000533946 C10orf35Q96D05 121 aa7.74□□□□□ -1.17
SSBP3-215ENST00000533946 PGLYRP3Q96LB9 341 aa7.74□□□□□ -1.17
SSBP3-215ENST00000533946 COMMD4Q9H0A8 199 aa7.74□□□□□ -1.17
SSBP3-215ENST00000533946 KCNK15Q9H427 330 aa7.74□□□□□ -1.17
SSBP3-215ENST00000533946 HEXA-AS1Q9H8Q6 139 aa7.74□□□□□ -1.17
SSBP3-215ENST00000533946 EXOSC4Q9NPD3 245 aaKnown RBP7.74□□□□□ -1.17
SSBP3-215ENST00000533946 SERTAD4Q9NUC0 356 aa7.74□□□□□ -1.17
SSBP3-215ENST00000533946 PAK1IP1Q9NWT1 392 aaPredicted RBP7.74□□□□□ -1.17
SSBP3-215ENST00000533946 DHDHQ9UQ10 334 aa7.74□□□□□ -1.17
SSBP3-215ENST00000533946 TET2Q6N021 2002 aaPredicted RBP7.74□□□□□ -1.17
SSBP3-215ENST00000533946 ODAMA1E959 279 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 TMEM212A6NML5 194 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 ADARB2-AS1A8MUL3 147 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 H0YJX3 145 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 MGST3O14880 152 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 DEGS1O15121 323 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 CD28P10747 220 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 IGFBP3P17936 291 aaPredicted RBP7.73□□□□□ -1.17
SSBP3-215ENST00000533946 DEFA6Q01524 100 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 ST3GAL4Q11206 333 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 ASCL4Q6XD76 172 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 TRAPPC6BQ86SZ2 158 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 SERPINA12Q8IW75 414 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 KLHDC1Q8N7A1 406 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 CCDC54Q8NEL0 328 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 ZNF555Q8NEP9 628 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 FBLIM1Q8WUP2 373 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 TMEM106AQ96A25 262 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 FOXRED1Q96CU9 486 aaPredicted RBP7.73□□□□□ -1.17
SSBP3-215ENST00000533946 Q96MT0 163 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 OR14A2Q96R54 314 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 TMEM133Q9H2Q1 129 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 TCF7L1Q9HCS4 588 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 BABAM2Q9NXR7 383 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 KIF25Q9UIL4 384 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 DIMT1Q9UNQ2 313 aaKnown RBP7.73□□□□□ -1.17
SSBP3-215ENST00000533946 LINC00312Q9Y6C7 94 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 SESN1Q9Y6P5 492 aa7.73□□□□□ -1.17
SSBP3-215ENST00000533946 DNAH9Q9NYC9 4486 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 TRBV5-7A0A0A0MS05 114 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 TRBV5-5A0A0J9YX44 114 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 hADV38S2A0JD32 116 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 LY6LH3BQJ8 138 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 SH2D1BO14796 132 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 GEMIN2O14893 280 aaKnown RBP7.72□□□□□ -1.17
SSBP3-215ENST00000533946 MPZL2O60487 215 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 HTR3BO95264 441 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 IGLV1-47P01700 117 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 PRB2P02812 416 aaPredicted RBP7.72□□□□□ -1.17
SSBP3-215ENST00000533946 AMY1AP04745 511 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 AMY2AP04746 511 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 VSIG10L2P0DP72 767 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 GABRA5P31644 462 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 SSTR5P35346 364 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 TGFBR2P37173 567 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 LGALS4P56470 323 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 MEF2CQ06413 473 aaPredicted RBP7.72□□□□□ -1.17
SSBP3-215ENST00000533946 SLC34A1Q06495 639 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 KLHL22Q53GT1 634 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 KRBOX4Q5JUW0 171 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 RPL22L1Q6P5R6 122 aaKnown RBP7.72□□□□□ -1.17
SSBP3-215ENST00000533946 AHSA2Q719I0 299 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 LYPD6Q86Y78 171 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 ABHD12Q8N2K0 398 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 DHRSXQ8N5I4 330 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 BPIFB6Q8NFQ5 453 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 OR5D14Q8NGL3 314 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 WIPF2Q8TF74 440 aaPredicted RBP7.72□□□□□ -1.17
SSBP3-215ENST00000533946 CCDC107Q8WV48 283 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 STMN2Q93045 179 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 TMEM80Q96HE8 168 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 FAM192AQ9GZU8 254 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 SEBOXQ9HB31 216 aaPredicted RBP7.72□□□□□ -1.17
SSBP3-215ENST00000533946 INPP5EQ9NRR6 644 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 FKBP14Q9NWM8 211 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 FBLN5Q9UBX5 448 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 PSORS1C1Q9UIG5 152 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 ING4Q9UNL4 249 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 TCF19Q9Y242 345 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 CAB39Q9Y376 341 aaPredicted RBP7.72□□□□□ -1.17
SSBP3-215ENST00000533946 PLXNB1O43157 2135 aa7.72□□□□□ -1.17
SSBP3-215ENST00000533946 VGLL3A8MV65 326 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 CASQ2O14958 399 aaPredicted RBP7.71□□□□□ -1.18
SSBP3-215ENST00000533946 OCM2P0CE71 109 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 OCMP0CE72 109 aaPredicted RBP7.71□□□□□ -1.18
SSBP3-215ENST00000533946 RAB3AP20336 220 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 NFYBP25208 207 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 DCKP27707 260 aa7.71□□□□□ -1.18
SSBP3-215ENST00000533946 ERP29P30040 261 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms