RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 KDM4BO94953 1096 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 DUS4LO95620 317 aaKnown RBP14.3□□□□□ -0.12
UBXN1-216ENST00000533908 CYB5AP00167 134 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 FAM90A15PP0C7V4 464 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 FAM90A13PP0C7W8 464 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 FAM90A14PP0C7W9 464 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 FAM90A24PP0C7X0 464 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 UBCP0CG48 685 aaKnown RBP14.3□□□□□ -0.12
UBXN1-216ENST00000533908 CGB3P0DN86 165 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 CGB7P0DN87 165 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 PRKACBP22694 351 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 SCN1BQ07699 218 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 KPNB1Q14974 876 aaKnown RBP14.3□□□□□ -0.12
UBXN1-216ENST00000533908 OSR2Q8N2R0 312 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 OR5D18Q8NGL1 313 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 MBOAT4Q96T53 435 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 COMMD4Q9H0A8 199 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 GABARAPL1Q9H0R8 117 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 PPIL3Q9H2H8 161 aaKnown RBP14.3□□□□□ -0.12
UBXN1-216ENST00000533908 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.3□□□□□ -0.12
UBXN1-216ENST00000533908 GLS2Q9UI32 602 aa14.3□□□□□ -0.12
UBXN1-216ENST00000533908 TOR1AO14656 332 aa14.29□□□□□ -0.12
UBXN1-216ENST00000533908 OR3A4PP47883 348 aa14.29□□□□□ -0.12
UBXN1-216ENST00000533908 TMEM244Q5VVB8 128 aa14.29□□□□□ -0.12
UBXN1-216ENST00000533908 LHFPL2Q6ZUX7 228 aa14.29□□□□□ -0.12
UBXN1-216ENST00000533908 OR51A4Q8NGJ6 313 aa14.29□□□□□ -0.12
UBXN1-216ENST00000533908 OPALINQ96PE5 141 aa14.29□□□□□ -0.12
UBXN1-216ENST00000533908 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.29□□□□□ -0.12
UBXN1-216ENST00000533908 SLC33A1O00400 549 aaPredicted RBP14.28□□□□□ -0.12
UBXN1-216ENST00000533908 IGHV3-7P01780 117 aa14.28□□□□□ -0.12
UBXN1-216ENST00000533908 ISG15P05161 165 aa14.28□□□□□ -0.12
UBXN1-216ENST00000533908 ATP6V1E1P36543 226 aa14.28□□□□□ -0.12
UBXN1-216ENST00000533908 CEACAM3P40198 252 aa14.28□□□□□ -0.12
UBXN1-216ENST00000533908 THBS3P49746 956 aa14.28□□□□□ -0.12
UBXN1-216ENST00000533908 PRRX1P54821 245 aa14.28□□□□□ -0.12
UBXN1-216ENST00000533908 DIAPH2-AS1Q14236 149 aa14.28□□□□□ -0.12
UBXN1-216ENST00000533908 RBM39Q14498 530 aaKnown RBP14.28□□□□□ -0.12
UBXN1-216ENST00000533908 CDK5R1Q15078 307 aa14.28□□□□□ -0.12
UBXN1-216ENST00000533908 KRBOX4Q5JUW0 171 aa14.28□□□□□ -0.12
UBXN1-216ENST00000533908 FDX2Q6P4F2 183 aa14.28□□□□□ -0.12
UBXN1-216ENST00000533908 ZDHHC13Q8IUH4 622 aa14.28□□□□□ -0.12
UBXN1-216ENST00000533908 LEAP2Q969E1 77 aa14.28□□□□□ -0.12
UBXN1-216ENST00000533908 SPSB1Q96BD6 273 aa14.28□□□□□ -0.12
UBXN1-216ENST00000533908 NOL4LQ96MY1 436 aaPredicted RBP14.28□□□□□ -0.12
UBXN1-216ENST00000533908 FUOMA2VDF0 154 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 PSMB11A5LHX3 300 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 J3QRE1 110 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 CSN2P05814 226 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 CCDC159P0C7I6 412 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 ZNF44P15621 663 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 ZNF20P17024 532 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 NFYBP25208 207 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 PTGFRP43088 359 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 RPL23AP62750 156 aaKnown RBP14.27□□□□□ -0.13
UBXN1-216ENST00000533908 ATXN7L3Q14CW9 347 aaPredicted RBP14.27□□□□□ -0.13
UBXN1-216ENST00000533908 THNSL2Q86YJ6 484 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 OR4D6Q8NGJ1 314 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 OR8J1Q8NGP2 316 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 KIRREL1Q96J84 757 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 B9D2Q9BPU9 175 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 ZNF649Q9BS31 505 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 LINC00527Q9UJ94 153 aa14.27□□□□□ -0.13
UBXN1-216ENST00000533908 KBTBD11-OT1A0A1B0GTJ5 212 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 ZNF729A6NN14 1252 aaPredicted RBP14.26□□□□□ -0.13
UBXN1-216ENST00000533908 OOSP1A8MZH6 123 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 CLIC3O95833 236 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 MT-ND2P03891 347 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 SNRNP70P08621 437 aaKnown RBP14.26□□□□□ -0.13
UBXN1-216ENST00000533908 FAM106CPP0CH98 169 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 MNDAP41218 407 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 ARHGDIBP52566 201 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 CD69Q07108 199 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 TMED1Q13445 227 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 C8orf86Q6ZUL3 223 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 OR2W3Q7Z3T1 314 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 FAM220AQ7Z4H9 259 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 OR13C9Q8NGT0 318 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 OR56B4Q8NH76 319 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 OR9G1Q8NH87 305 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 CREB3L1Q96BA8 519 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 HRASLS5Q96KN8 279 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 GABARAPL3Q9BY60 117 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 RIBC2Q9H4K1 309 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 MOB4Q9Y3A3 225 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 PCDHGB5Q9Y5G0 923 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 HSPE1-MOB4S4R3N1 261 aa14.26□□□□□ -0.13
UBXN1-216ENST00000533908 A0A1W2PPI3 338 aa14.25□□□□□ -0.13
UBXN1-216ENST00000533908 LINC01548A6NM66 108 aa14.25□□□□□ -0.13
UBXN1-216ENST00000533908 OR4C45A6NMZ5 311 aa14.25□□□□□ -0.13
UBXN1-216ENST00000533908 J3QR06 171 aa14.25□□□□□ -0.13
UBXN1-216ENST00000533908 M0QZK8 103 aa14.25□□□□□ -0.13
UBXN1-216ENST00000533908 DEGS1O15121 323 aa14.25□□□□□ -0.13
UBXN1-216ENST00000533908 FASP25445 335 aa14.25□□□□□ -0.13
UBXN1-216ENST00000533908 ZP1P60852 638 aa14.25□□□□□ -0.13
UBXN1-216ENST00000533908 HNF4GQ14541 408 aa14.25□□□□□ -0.13
UBXN1-216ENST00000533908 CCDC144NLQ6NUI1 221 aa14.25□□□□□ -0.13
UBXN1-216ENST00000533908 SAXO1Q8IYX7 474 aa14.25□□□□□ -0.13
UBXN1-216ENST00000533908 DRAM1Q8N682 238 aa14.25□□□□□ -0.13
UBXN1-216ENST00000533908 C5orf56Q8N8D9 126 aa14.25□□□□□ -0.13
UBXN1-216ENST00000533908 OR13A1Q8NGR1 328 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms