RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 Q8N1Y9 231 aa6.05□□□□□ -1.44
NXF1-215ENST00000533440 Q8N6K4 173 aa6.05□□□□□ -1.44
NXF1-215ENST00000533440 IQCF1Q8N6M8 205 aa6.05□□□□□ -1.44
NXF1-215ENST00000533440 Q8N9W7 124 aa6.05□□□□□ -1.44
NXF1-215ENST00000533440 OR4D6Q8NGJ1 314 aa6.05□□□□□ -1.44
NXF1-215ENST00000533440 OR1N2Q8NGR9 330 aa6.05□□□□□ -1.44
NXF1-215ENST00000533440 UBE2E2Q96LR5 201 aa6.05□□□□□ -1.44
NXF1-215ENST00000533440 YIPF3Q9GZM5 350 aa6.05□□□□□ -1.44
NXF1-215ENST00000533440 SPAG4Q9NPE6 437 aa6.05□□□□□ -1.44
NXF1-215ENST00000533440 MAGEL2Q9UJ55 1249 aa6.05□□□□□ -1.44
NXF1-215ENST00000533440 ZNF580Q9UK33 172 aa6.05□□□□□ -1.44
NXF1-215ENST00000533440 AMMECR1Q9Y4X0 333 aaPredicted RBP6.05□□□□□ -1.44
NXF1-215ENST00000533440 TRBV2A0A0J9YWF9 115 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 ODAMA1E959 279 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 FUOMA2VDF0 154 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 ZNF729A6NN14 1252 aaPredicted RBP6.04□□□□□ -1.44
NXF1-215ENST00000533440 J3QR06 171 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 OVOL1O14753 267 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 RRP9O43818 475 aaKnown RBP6.04□□□□□ -1.44
NXF1-215ENST00000533440 SAP30O75446 220 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 SASH3O75995 380 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 CSN2P05814 226 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 CGB3P0DN86 165 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 CGB7P0DN87 165 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 CCL1P22362 96 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 SLC2A5P22732 501 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 MAGEA2P43356 314 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 POU3F4P49335 361 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 FUT6P51993 359 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 RIDAP52758 137 aaKnown RBP6.04□□□□□ -1.44
NXF1-215ENST00000533440 AESQ08117 197 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 PPP1R8Q12972 351 aaKnown RBP6.04□□□□□ -1.44
NXF1-215ENST00000533440 MADCAM1Q13477 382 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 SPIN3Q5JUX0 258 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 ELMOD2Q8IZ81 293 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 FAM58AQ8N1B3 248 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 ZNF491Q8N8L2 437 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 OR6Q1Q8NGQ2 317 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 TEX47Q8TBZ9 253 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 DCUN1D4Q92564 292 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 COQ2Q96H96 371 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 KIRREL1Q96J84 757 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 EAF1Q96JC9 268 aaPredicted RBP6.04□□□□□ -1.44
NXF1-215ENST00000533440 NSMCE2Q96MF7 247 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 SPATA25Q9BR10 227 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 MOB1AQ9H8S9 216 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 GNB4Q9HAV0 340 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 PLSCR3Q9NRY6 295 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 FGFR1OP2Q9NVK5 253 aa6.04□□□□□ -1.44
NXF1-215ENST00000533440 RBFOX1Q9NWB1 397 aaKnown RBP6.04□□□□□ -1.44
NXF1-215ENST00000533440 KBTBD11-OT1A0A1B0GTJ5 212 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 MAGEA13PA6NCF6 341 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 NCBP2LA6PVI3 153 aaKnown RBP6.03□□□□□ -1.44
NXF1-215ENST00000533440 HMGB1P1B2RPK0 211 aaPredicted RBP6.03□□□□□ -1.44
NXF1-215ENST00000533440 LOC110117498-PIK3R3F6TDL0 507 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 SIRPB1O00241 398 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 MPZL2O60487 215 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 OR2H2O95918 312 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 IGF1P05019 195 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 HSD17B1P14061 328 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 PRKACAP17612 351 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 BCL3P20749 454 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 NFYBP25208 207 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 PPIFP30405 207 aaKnown RBP6.03□□□□□ -1.44
NXF1-215ENST00000533440 KIR3DL2P43630 455 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 MTNR1BP49286 362 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 GNB1P62873 340 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 ZNF816Q0VGE8 651 aaPredicted RBP6.03□□□□□ -1.44
NXF1-215ENST00000533440 SRSF7Q16629 238 aaKnown RBP eCLIP6.03□□□□□ -1.44
NXF1-215ENST00000533440 MICAQ29983 383 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 ACSM6Q6P461 480 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 LYPD6Q86Y78 171 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 CPOQ8IVL8 374 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 IZUMO1Q8IYV9 350 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 BBS1Q8NFJ9 593 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 IL17DQ8TAD2 202 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 HAVCR2Q8TDQ0 301 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 ASB17Q8WXJ9 295 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 DLX4Q92988 240 aaPredicted RBP6.03□□□□□ -1.44
NXF1-215ENST00000533440 ST6GALNAC6Q969X2 333 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 BORCS8Q96FH0 119 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 KCTD7Q96MP8 289 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 NIPSNAP1Q9BPW8 284 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 LINC00574Q9H8X3 128 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 OR52A1Q9UKL2 312 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 COPS3Q9UNS2 423 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 PSG11Q9UQ72 335 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 VSIG4Q9Y279 399 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 TMEM14AQ9Y6G1 99 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 R4GMQ9 66 aa6.03□□□□□ -1.44
NXF1-215ENST00000533440 IGHV1-3A0A0C4DH29 117 aa6.02□□□□□ -1.45
NXF1-215ENST00000533440 H3BN98 237 aa6.02□□□□□ -1.45
NXF1-215ENST00000533440 SH2D1BO14796 132 aa6.02□□□□□ -1.45
NXF1-215ENST00000533440 ARPC2O15144 300 aa6.02□□□□□ -1.45
NXF1-215ENST00000533440 GATBO75879 557 aaKnown RBP6.02□□□□□ -1.45
NXF1-215ENST00000533440 IFNA6P05013 189 aa6.02□□□□□ -1.45
NXF1-215ENST00000533440 OR5H8P0DN80 308 aa6.02□□□□□ -1.45
NXF1-215ENST00000533440 CALCBP10092 127 aa6.02□□□□□ -1.45
NXF1-215ENST00000533440 VDAC1P21796 283 aa6.02□□□□□ -1.45
NXF1-215ENST00000533440 SNU13P55769 128 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms