RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 PHF1O43189 567 aaPredicted RBP13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 NAPSAO96009 420 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 GNRHRP30968 328 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 GLP1RP43220 463 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 HERPUD1Q15011 391 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 TMEM268Q5VZI3 342 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 TMPRSS7Q7RTY8 843 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 CCDC36Q8IYA8 594 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 WDYHV1Q96HA8 205 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 SUCNR1Q9BXA5 334 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 Q9N2K0 584 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 RCC2Q9P258 522 aaKnown RBP13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 CFAP47Q6ZTR5 3102 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 FAM90A10PA6NDY2 464 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 FAM90A18PA6NE21 464 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 FAM90A16PA6NEW6 464 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 FAM90A20PA6NIJ5 464 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 FAM90A8PA6NJQ4 464 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 FAM90A7PA6NKC0 464 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 FAM90A22PA8MWA6 464 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 FAM90A12PA8MX19 464 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 FAM90A5PA8MXJ8 464 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 FAM90A23PA8MXZ1 464 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 H7C1Q1 480 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 FAM90A15PP0C7V4 464 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 FAM90A13PP0C7W8 464 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 FAM90A14PP0C7W9 464 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 FAM90A24PP0C7X0 464 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 SMCO1Q147U7 214 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 SAXO1Q8IYX7 474 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 OR5P3Q8WZ94 311 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 POM121Q96HA1 1249 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 IP6K3Q96PC2 410 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 GPHA2Q96T91 129 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 HRH4Q9H3N8 390 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 TMEM231Q9H6L2 316 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 PLSCR2Q9NRY7 297 aa13.13□□□□□ -0.31
CACNA1E-208ENST00000533229 FBXO24O75426 580 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 ATG12O94817 140 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 LPAR6P43657 344 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 HERV-K104P61576 105 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 PLP2Q04941 152 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 HAGHLQ6PII5 290 aaPredicted RBP13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 OR5A2Q8NGI9 324 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 OR1K1Q8NGR3 316 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 ARL11Q969Q4 196 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 SMIM8Q96KF7 97 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 SYT3Q9BQG1 590 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 TMEM9BQ9NQ34 198 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 ZDHHC8Q9ULC8 765 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 TRAPPC2LH3BP13 241 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 GPR31O00270 319 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 ZNF806P0C7X5 589 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 CD46P15529 392 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 KCNJ3P48549 501 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 CLN3Q13286 438 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 GUCA2BQ16661 112 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 C20orf204Q6ZNR8 217 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 Q6ZS49 121 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 IQCF2Q8IXL9 164 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 SLC35G3Q8N808 338 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 MMP26Q9NRE1 261 aa13.12□□□□□ -0.31
CACNA1E-208ENST00000533229 IGKV1-6A0A0C4DH72 117 aa13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 MPPED1O15442 326 aa13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 SPATA46Q5T0L3 261 aa13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 FBXW9Q5XUX1 488 aa13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 OR2T2Q6IF00 324 aa13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 MEX3BQ6ZN04 569 aaKnown RBP13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 MDP1Q86V88 176 aa13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 MYPOPQ86VE0 399 aaPredicted RBP13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 LDLRAD3Q86YD5 345 aa13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 LGI3Q8N145 548 aa13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 C17orf78Q8N4C9 275 aa13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 BCL2L2Q92843 193 aaPredicted RBP13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 USB1Q9BQ65 265 aaKnown RBP13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 ADAT1Q9BUB4 502 aaKnown RBP13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 NKX6-2Q9C056 277 aaPredicted RBP13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 LHX6Q9UPM6 363 aa13.11□□□□□ -0.31
CACNA1E-208ENST00000533229 TRGV5A0A0B4J1U4 118 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 IGKV1D-13A0A0B4J2D9 117 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 C3orf85A0A1B0GTC6 90 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 WISP2O76076 250 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 IGKV1-13P0DP09 117 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 PRKACAP17612 351 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 IL32P24001 234 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 APLNRP35414 380 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 ID4P47928 161 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 ARG2P78540 354 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 PMP22Q01453 160 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 ZNF169Q14929 603 aaPredicted RBP13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 ZNF766Q5HY98 468 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 ZNF818PQ6ZRF7 136 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 MKXQ8IYA7 352 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 PUSL1Q8N0Z8 303 aaKnown RBP13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 HIST1H2AAQ96QV6 131 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 FAM96BQ9Y3D0 163 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 E5RGE8 158 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 RHBDL1O75783 438 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 JTBO76095 146 aa13.1□□□□□ -0.31
CACNA1E-208ENST00000533229 CA6P23280 308 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms