RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 KHDC1LQ5JSQ8 128 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 MINOS1Q5TGZ0 78 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 ZNF782Q6ZMW2 699 aaPredicted RBP9.95□□□□□ -0.82
CAPN1-223ENST00000533079 FAM57BQ71RH2 274 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 SLC35F2Q8IXU6 374 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 TIGD4Q8IY51 512 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 OR10H4Q8NGA5 316 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 ZNF671Q8TAW3 534 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 RNF133Q8WVZ7 376 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 RNF170Q96K19 258 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 HIST1H2AAQ96QV6 131 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 DCSTAMPQ9H295 470 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 LIN7BQ9HAP6 207 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 CCDC59Q9P031 241 aaKnown RBP9.95□□□□□ -0.82
CAPN1-223ENST00000533079 SSR3Q9UNL2 185 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 TMEM14AQ9Y6G1 99 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 MINOS1-NBL1R4GNA1 71 aa9.95□□□□□ -0.82
CAPN1-223ENST00000533079 A0A1W2PQL4 384 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-223ENST00000533079 OR5B21A6NL26 309 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 ZNF593O00488 134 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-223ENST00000533079 GYPBP06028 91 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 CHRM2P08172 466 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 CCL3L1P16619 93 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 GPM6AP51674 278 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 ZNF273Q14593 569 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 CASC10Q5T4H9 136 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 ZNF684Q5T5D7 378 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 LIPKQ5VXJ0 399 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 LYPD4Q6UWN0 246 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 PLEKHG7Q6ZR37 379 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 SHFQ7M4L6 423 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 KRT74Q7RTS7 529 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 MRPL41Q8IXM3 137 aaKnown RBP9.94□□□□□ -0.82
CAPN1-223ENST00000533079 MS4A15Q8N5U1 240 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 MUC7Q8TAX7 377 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 NDNFQ8TB73 568 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 ZNRF4Q8WWF5 429 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 PGAM5Q96HS1 289 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 CHCHD6Q9BRQ6 235 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 CENPOQ9BU64 300 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 SLIRPQ9GZT3 109 aaKnown RBP9.94□□□□□ -0.82
CAPN1-223ENST00000533079 FGF23Q9GZV9 251 aaPredicted RBP9.94□□□□□ -0.82
CAPN1-223ENST00000533079 GSTK1Q9Y2Q3 226 aa9.94□□□□□ -0.82
CAPN1-223ENST00000533079 FAM90A22PA8MWA6 464 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 ZNF670-ZNF695F2Z2N8 137 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 SULT1C4O75897 302 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 IL1AP01583 271 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 PGA5P0DJD9 388 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 ACKR3P25106 362 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 DLX6P56179 175 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 CEACAM21Q3KPI0 293 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 DMKNQ6E0U4 476 aaPredicted RBP9.93□□□□□ -0.82
CAPN1-223ENST00000533079 RPL22L1Q6P5R6 122 aaKnown RBP9.93□□□□□ -0.82
CAPN1-223ENST00000533079 ETV3LQ6ZN32 361 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 ACP7Q6ZNF0 438 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 ZNF454Q8N9F8 522 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 POC1AQ8NBT0 407 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 CAPSLQ8WWF8 208 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 PIGCQ92535 297 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 OR51I2Q9H344 312 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 SACSQ9NZJ4 4579 aa9.93□□□□□ -0.82
CAPN1-223ENST00000533079 A0A075B6Q4 140 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 LOC100506127A0A0U1RQW1 187 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 RFPL4AA6NLU0 287 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 RFPL4AL1F8VTS6 287 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 LALBAP00709 142 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 TK1P04183 234 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 IGHV1-8P0DP01 117 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 CELP19835 753 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 ALOX5APP20292 161 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 OPRL1P41146 370 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 THBS3P49746 956 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 ARHGDIBP52566 201 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 GBX2P52951 348 aaPredicted RBP9.92□□□□□ -0.82
CAPN1-223ENST00000533079 LSM3P62310 102 aaKnown RBP9.92□□□□□ -0.82
CAPN1-223ENST00000533079 ZNF829Q3KNS6 432 aaPredicted RBP9.92□□□□□ -0.82
CAPN1-223ENST00000533079 NKAPLQ5M9Q1 402 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 LDLRAD2Q5SZI1 272 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 CROCCP3Q8IVE0 287 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 CD177Q8N6Q3 437 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 Q8NFD4 153 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 OR51L1Q8NGJ5 315 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 OR6Q1Q8NGQ2 317 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 OR6K6Q8NGW6 343 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 S100ZQ8WXG8 99 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 ASB17Q8WXJ9 295 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 AQP3Q92482 292 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 PHYHIPQ92561 330 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 KCTD7Q96MP8 289 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 ABHD6Q9BV23 337 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 ISG20L2Q9H9L3 353 aaKnown RBP9.92□□□□□ -0.82
CAPN1-223ENST00000533079 TXNL4BQ9NX01 149 aaKnown RBP9.92□□□□□ -0.82
CAPN1-223ENST00000533079 ZNF319Q9P2F9 582 aa9.92□□□□□ -0.82
CAPN1-223ENST00000533079 METTL15A6NJ78 407 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 ZNF732B4DXR9 585 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 J3QLW9 94 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 M0QZK8 103 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 SERPINA3P01011 423 aa9.91□□□□□ -0.82
CAPN1-223ENST00000533079 MRPL3P09001 348 aaKnown RBP9.91□□□□□ -0.82
CAPN1-223ENST00000533079 H2BFMP0C1H6 154 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms