RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ZNF420Q8TAQ5 688 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-213ENST00000530784 C10orf82Q8WW14 230 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 ACOT11Q8WXI4 607 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-213ENST00000530784 LZICQ8WZA0 190 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 SLC7A6Q92536 515 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 PTP4A1Q93096 173 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 TMIGD2Q96BF3 282 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 RASD2Q96D21 266 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 Q96M85 177 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 OR8B2Q96RD0 313 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 ATF6BQ99941 703 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 RERGLQ9H628 205 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 MRGBPQ9NV56 204 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 PTTG3PQ9NZH4 202 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 MIOXQ9UGB7 285 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 ATPIF1Q9UII2 106 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 POLR1DQ9Y2S0 133 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 NSG2Q9Y328 171 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 TANC2Q9HCD6 1990 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 A0A087WUU8 490 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 IGHV3-64DA0A0J9YX35 117 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 KIR2DS1A0A191URI9 304 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 A0A1B0GUS0 222 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 PRSS37A4D1T9 235 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 OR6C6A6NF89 314 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 F5H5P2 479 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 CDC42EP2O14613 210 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 RER1O15258 196 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 SLC16A7O60669 478 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 FSTL3O95633 263 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 ZNF682O95780 498 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 MT-ND2P03891 347 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 CTLA4P16410 223 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 BCL3P20749 454 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 C4BPBP20851 252 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 OMGP23515 440 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 IER3P46695 156 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 YAP1P46937 504 aaKnown RBP5.27□□□□□ -1.57
CSDE1-213ENST00000530784 RAG2P55895 527 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 LSM6P62312 80 aaKnown RBP5.27□□□□□ -1.57
CSDE1-213ENST00000530784 KIAA0141Q14154 515 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-213ENST00000530784 ZNF181Q2M3W8 571 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 DEFB112Q30KQ8 113 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 C15orf32Q32M92 178 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 ZNF404Q494X3 552 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 ZBED5Q49AG3 693 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 GPR157Q5UAW9 335 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 OTPQ5XKR4 325 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 OR2T2Q6IF00 324 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 C16orf87Q6PH81 154 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 BRD3OSQ6XYD6 125 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 FAM122BQ7Z309 247 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 VTCN1Q7Z7D3 282 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 ADCK1Q86TW2 530 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 NHLRC2Q8NBF2 726 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 BHLHE23Q8NDY6 225 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 OR4F5Q8NH21 305 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 APOBEC3DQ96AK3 386 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-213ENST00000530784 TMEM246Q9BRR3 403 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 HCAR1Q9BXC0 346 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 HDHD2Q9H0R4 259 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 SYT4Q9H2B2 425 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 BEX1Q9HBH7 125 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 TMEM165Q9HC07 324 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 GID8Q9NWU2 228 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 CLN8Q9UBY8 286 aa5.27□□□□□ -1.57
CSDE1-213ENST00000530784 SOX21Q9Y651 276 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-213ENST00000530784 IQCF6A8MYZ5 107 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 H0YL77 283 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 PHYHO14832 338 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 FFAR1O14842 300 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 MLNRO43193 412 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 ENSAO43768 121 aaKnown RBP5.26□□□□□ -1.57
CSDE1-213ENST00000530784 NDUFB2O95178 105 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 CRYBA1P05813 215 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 TROVE2P10155 538 aaKnown RBP eCLIP5.26□□□□□ -1.57
CSDE1-213ENST00000530784 GPR183P32249 361 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 BPIFB3P59826 476 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 FGF12P61328 243 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 IFI44LQ53G44 452 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 CCDC92Q53HC0 331 aaPredicted RBP5.26□□□□□ -1.57
CSDE1-213ENST00000530784 DNM1P34Q6PK57 102 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 TBPL2Q6SJ96 375 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 ARPINQ7Z6K5 226 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 CYP4Z1Q86W10 505 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 OR11L1Q8NGX0 322 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 CCT8L2Q96SF2 557 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 GPX7Q96SL4 187 aaPredicted RBP5.26□□□□□ -1.57
CSDE1-213ENST00000530784 COQ7Q99807 217 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 SLC30A2Q9BRI3 323 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 ATG101Q9BSB4 218 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 MMADHCQ9H3L0 296 aaPredicted RBP5.26□□□□□ -1.57
CSDE1-213ENST00000530784 ANKRD19PQ9H560 264 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 C5orf66Q9H5L9 145 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 MARCH7Q9H992 704 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 NMNAT1Q9HAN9 279 aaPredicted RBP5.26□□□□□ -1.57
CSDE1-213ENST00000530784 TNFRSF19Q9NS68 423 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 AP3M1Q9Y2T2 418 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 DYSFO75923 2080 aa5.26□□□□□ -1.57
CSDE1-213ENST00000530784 MGAM2Q2M2H8 2515 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms