RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 EBAG9O00559 213 aa12.7□□□□□ -0.38
COL16A1-216ENST00000529928 EI24O14681 340 aa12.7□□□□□ -0.38
COL16A1-216ENST00000529928 SYT7O43581 403 aa12.7□□□□□ -0.38
COL16A1-216ENST00000529928 SERPINA3P01011 423 aa12.7□□□□□ -0.38
COL16A1-216ENST00000529928 DUSP1P28562 367 aa12.7□□□□□ -0.38
COL16A1-216ENST00000529928 HTR1FP30939 366 aa12.7□□□□□ -0.38
COL16A1-216ENST00000529928 NPBWR2P48146 333 aa12.7□□□□□ -0.38
COL16A1-216ENST00000529928 SLC35B1P78383 322 aa12.7□□□□□ -0.38
COL16A1-216ENST00000529928 THNSL2Q86YJ6 484 aa12.7□□□□□ -0.38
COL16A1-216ENST00000529928 ZNF695Q8IW36 515 aa12.7□□□□□ -0.38
COL16A1-216ENST00000529928 FAM58AQ8N1B3 248 aa12.7□□□□□ -0.38
COL16A1-216ENST00000529928 EME1Q96AY2 570 aa12.7□□□□□ -0.38
COL16A1-216ENST00000529928 HRASLS5Q96KN8 279 aa12.7□□□□□ -0.38
COL16A1-216ENST00000529928 NOL4LQ96MY1 436 aaPredicted RBP12.7□□□□□ -0.38
COL16A1-216ENST00000529928 PCDHB16Q9NRJ7 776 aa12.7□□□□□ -0.38
COL16A1-216ENST00000529928 H2AFY2Q9P0M6 372 aaPredicted RBP12.7□□□□□ -0.38
COL16A1-216ENST00000529928 WARS2Q9UGM6 360 aaKnown RBP12.7□□□□□ -0.38
COL16A1-216ENST00000529928 MRM2Q9UI43 246 aaKnown RBP12.7□□□□□ -0.38
COL16A1-216ENST00000529928 A0A087X0M5 115 aa12.69□□□□□ -0.38
COL16A1-216ENST00000529928 A0A1B0GX30 115 aa12.69□□□□□ -0.38
COL16A1-216ENST00000529928 SERPINE3A8MV23 424 aa12.69□□□□□ -0.38
COL16A1-216ENST00000529928 ENTPD6O75354 484 aa12.69□□□□□ -0.38
COL16A1-216ENST00000529928 PRKACAP17612 351 aa12.69□□□□□ -0.38
COL16A1-216ENST00000529928 PTGFRP43088 359 aa12.69□□□□□ -0.38
COL16A1-216ENST00000529928 RBP2P50120 134 aa12.69□□□□□ -0.38
COL16A1-216ENST00000529928 ALDH3A2P51648 485 aa12.69□□□□□ -0.38
COL16A1-216ENST00000529928 RBM39Q14498 530 aaKnown RBP12.69□□□□□ -0.38
COL16A1-216ENST00000529928 ODF4Q2M2E3 257 aa12.69□□□□□ -0.38
COL16A1-216ENST00000529928 CCDC54Q8NEL0 328 aa12.69□□□□□ -0.38
COL16A1-216ENST00000529928 OR4D6Q8NGJ1 314 aa12.69□□□□□ -0.38
COL16A1-216ENST00000529928 FAM90A18PA6NE21 464 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 FAM90A16PA6NEW6 464 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 FAM90A20PA6NIJ5 464 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 FAM90A9PA6NNJ1 464 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 FAM90A12PA8MX19 464 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 FAM90A5PA8MXJ8 464 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 ZNF670-ZNF695F2Z2N8 137 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 CCL24O00175 119 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 SIRPB1O00241 398 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 SH2D1BO14796 132 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 FAM90A15PP0C7V4 464 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 FAM90A13PP0C7W8 464 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 FAM90A14PP0C7W9 464 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 FAM90A24PP0C7X0 464 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 BCL3P20749 454 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 GDNFP39905 211 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 GLIPR1P48060 266 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 ATP1B3P54709 279 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 SNU13P55769 128 aaKnown RBP12.68□□□□□ -0.38
COL16A1-216ENST00000529928 RAB25P57735 213 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 SLC25A30Q5SVS4 291 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 C9orf66Q5T8R8 295 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 CBR4Q8N4T8 237 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 C5orf56Q8N8D9 126 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 DNAAF1Q8NEP3 725 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 TOMM40LQ969M1 308 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 RNF166Q96A37 237 aaPredicted RBP12.68□□□□□ -0.38
COL16A1-216ENST00000529928 RPEQ96AT9 228 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 C10orf35Q96D05 121 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 RAX2Q96IS3 184 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 PRR25Q96S07 402 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 MBOAT4Q96T53 435 aa12.68□□□□□ -0.38
COL16A1-216ENST00000529928 EXOSC4Q9NPD3 245 aaKnown RBP12.68□□□□□ -0.38
COL16A1-216ENST00000529928 AMMECR1Q9Y4X0 333 aaPredicted RBP12.68□□□□□ -0.38
COL16A1-216ENST00000529928 A0A1W2PQL4 384 aaPredicted RBP12.67□□□□□ -0.38
COL16A1-216ENST00000529928 ODAMA1E959 279 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 H3BSH0 61 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 J3QRE1 110 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 FGF16O43320 207 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 RPP14O95059 124 aaKnown RBP12.67□□□□□ -0.38
COL16A1-216ENST00000529928 APOL3O95236 402 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 OR2H2O95918 312 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 KRT8P05787 483 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 SNRNP70P08621 437 aaKnown RBP12.67□□□□□ -0.38
COL16A1-216ENST00000529928 CALCBP10092 127 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 POU3F4P49335 361 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 LUMP51884 338 aaPredicted RBP12.67□□□□□ -0.38
COL16A1-216ENST00000529928 SNRPGP62308 76 aaKnown RBP12.67□□□□□ -0.38
COL16A1-216ENST00000529928 AESQ08117 197 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 TMED1Q13445 227 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 HES1Q14469 280 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 CASC10Q5T4H9 136 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 SLC35E3Q7Z769 313 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 CATSPERDQ86XM0 798 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 FOXRED2Q8IWF2 684 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 YIPF7Q8N8F6 280 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 OR5M8Q8NGP6 311 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 OR56B4Q8NH76 319 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 MUC7Q8TAX7 377 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 TRUB1Q8WWH5 349 aaKnown RBP12.67□□□□□ -0.38
COL16A1-216ENST00000529928 PP6455Q8WZ26 134 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 DUX3Q96PT4 197 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 SLC29A1Q99808 456 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 ADI1Q9BV57 179 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 S100A14Q9HCY8 104 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 HMG20AQ9NP66 347 aa12.67□□□□□ -0.38
COL16A1-216ENST00000529928 ZNF729A6NN14 1252 aaPredicted RBP12.66□□□□□ -0.38
COL16A1-216ENST00000529928 IGHG2P01859 326 aa12.66□□□□□ -0.38
COL16A1-216ENST00000529928 CSN2P05814 226 aa12.66□□□□□ -0.38
COL16A1-216ENST00000529928 OR2T7P0C7T2 308 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms