RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 OR7C1O76099 320 aaPredicted RBP11.58□□□□□ -0.56
USF1-209ENST00000529476 ECDO95905 644 aaPredicted RBP11.58□□□□□ -0.56
USF1-209ENST00000529476 RPS19P39019 145 aaKnown RBP11.58□□□□□ -0.56
USF1-209ENST00000529476 SERPINB10P48595 397 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 RPS27AP62979 156 aaKnown RBP11.58□□□□□ -0.56
USF1-209ENST00000529476 PLA2G7Q13093 441 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 GRK1Q15835 563 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 DCAF12L2Q5VW00 463 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 CD276Q5ZPR3 534 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 OR2W3Q7Z3T1 314 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 OR8H2Q8N162 312 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 CHST4Q8NCG5 386 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 OR4M1Q8NGD0 313 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 RAB40AQ8WXH6 277 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 Q96M66 194 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 NUDT16L1Q9BRJ7 211 aaKnown RBP11.58□□□□□ -0.56
USF1-209ENST00000529476 DCTN5Q9BTE1 182 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 TMEM59Q9BXS4 323 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 LIN7BQ9HAP6 207 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 RPUSD1Q9UJJ7 312 aaKnown RBP11.58□□□□□ -0.56
USF1-209ENST00000529476 KCNS2Q9ULS6 477 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 INSIG2Q9Y5U4 225 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 ATRQ13535 2644 aa11.58□□□□□ -0.56
USF1-209ENST00000529476 DSCAML1Q8TD84 2053 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 PPIAL4CA0A0B4J2A2 164 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 A0A0G2JMP0 313 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 A0A0X1KG70 313 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 TMEM272A0A1B0GTI8 110 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 A8MV72 311 aaPredicted RBP11.57□□□□□ -0.56
USF1-209ENST00000529476 LDLRAD4O15165 306 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 GPR37O15354 613 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 ENSAO43768 121 aaKnown RBP11.57□□□□□ -0.56
USF1-209ENST00000529476 IL1AP01583 271 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 EDDM3AQ14507 147 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 MPV17LQ2QL34 196 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 PAN3Q58A45 887 aaKnown RBP11.57□□□□□ -0.56
USF1-209ENST00000529476 ATAD3CQ5T2N8 411 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 IDNKQ5T6J7 187 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 FAHD2BQ6P2I3 314 aaPredicted RBP11.57□□□□□ -0.56
USF1-209ENST00000529476 GDPD3Q7L5L3 318 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 LINC00596Q86U02 117 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 BPIFB2Q8N4F0 458 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 SUMF2Q8NBJ7 301 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 OR4M2Q8NGB6 313 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 OR5D13Q8NGL4 314 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 PPP1R35Q8TAP8 253 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 FAHD2AQ96GK7 314 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 CYYR1Q96J86 154 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 NICN1Q9BSH3 213 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 IFT22Q9H7X7 185 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 C19orf12Q9NSK7 152 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 FBLN5Q9UBX5 448 aa11.57□□□□□ -0.56
USF1-209ENST00000529476 A0A0A6YYD4 124 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 KIR2DS1A0A191URI9 304 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 INAFM1C9JVW0 142 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 MGST3O14880 152 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 SNRPBP14678 240 aaKnown RBP11.56□□□□□ -0.56
USF1-209ENST00000529476 RANBP1P43487 201 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 EFNB2P52799 333 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 EDDM3BP56851 147 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 ATXN7L3Q14CW9 347 aaPredicted RBP11.56□□□□□ -0.56
USF1-209ENST00000529476 C11orf91Q3C1V1 193 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 SIGIRRQ6IA17 410 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 BRICD5Q6PL45 260 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 BTNL3Q6UXE8 466 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 FAM185AQ8N0U4 392 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 TPRX1Q8N7U7 411 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 LY6G5BQ8NDX9 201 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 C8orf46Q8TAG6 207 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 NDNFQ8TB73 568 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 DPCDQ9BVM2 203 aaPredicted RBP11.56□□□□□ -0.56
USF1-209ENST00000529476 TM2D1Q9BX74 207 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 LPAR5Q9H1C0 372 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 ING3Q9NXR8 418 aa11.56□□□□□ -0.56
USF1-209ENST00000529476 TRBV23-1A0A0A0MS06 115 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 A0A1W2PQ09 198 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 MEX3AA1L020 520 aaKnown RBP11.55□□□□□ -0.56
USF1-209ENST00000529476 FAM90A10PA6NDY2 464 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 FAM90A18PA6NE21 464 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 FAM90A16PA6NEW6 464 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 FAM90A20PA6NIJ5 464 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 FAM90A8PA6NJQ4 464 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 FAM90A7PA6NKC0 464 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 FAM90A22PA8MWA6 464 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 FAM90A12PA8MX19 464 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 FAM90A5PA8MXJ8 464 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 FAM90A23PA8MXZ1 464 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 PAHP00439 452 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 AVPP01185 164 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 FAM90A15PP0C7V4 464 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 FAM90A13PP0C7W8 464 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 FAM90A14PP0C7W9 464 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 FAM90A24PP0C7X0 464 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 PPIAL4GP0DN37 164 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 GATA3P23771 443 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 TMBIM6P55061 237 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 RPL31P62899 125 aaKnown RBP11.55□□□□□ -0.56
USF1-209ENST00000529476 AESQ08117 197 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 CR1LQ2VPA4 569 aa11.55□□□□□ -0.56
USF1-209ENST00000529476 LGALS14Q8TCE9 139 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms