RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 GAFA1Q96PS6 74 aa10.14□□□□□ -0.79
TRAF3IP2-211ENST00000528599 ATG5Q9H1Y0 275 aa10.14□□□□□ -0.79
TRAF3IP2-211ENST00000528599 NARFLQ9H6Q4 476 aa10.14□□□□□ -0.79
TRAF3IP2-211ENST00000528599 SEBOXQ9HB31 216 aaPredicted RBP10.14□□□□□ -0.79
TRAF3IP2-211ENST00000528599 MAB21L2Q9Y586 359 aa10.14□□□□□ -0.79
TRAF3IP2-211ENST00000528599 F8P00451 2351 aa10.14□□□□□ -0.79
TRAF3IP2-211ENST00000528599 TRAV24A0A0B4J272 114 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 A0A1W2PQ09 198 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 CEACAM18A8MTB9 384 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FOXI3A8MTJ6 420 aaPredicted RBP10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 RAB27BO00194 218 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 SIRPB1O00241 398 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 SH2D1BO14796 132 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 DEGS1O15121 323 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 OR7C1O76099 320 aaPredicted RBP10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 SELLP14151 372 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 ZNF44P15621 663 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 CPT2P23786 658 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 NR4A2P43354 598 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 TMEM50BP56557 158 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 COL10A1Q03692 680 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 MPV17LQ2QL34 196 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 TMEM155Q4W5P6 130 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 UBE2NLQ5JXB2 153 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 HACD4Q5VWC8 232 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 MUC20Q8N307 709 aaPredicted RBP10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 Q8N402 240 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM216BQ8N7L0 139 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 DTX3Q8N9I9 347 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 WFDC11Q8NEX6 87 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 SDSLQ96GA7 329 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 PIMREGQ9BSJ6 248 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 ABCG5Q9H222 651 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 CTSZQ9UBR2 303 aa10.13□□□□□ -0.79
TRAF3IP2-211ENST00000528599 TMEM82A0PJX8 343 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 METTL21EPA6NDL7 271 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM90A10PA6NDY2 464 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM90A18PA6NE21 464 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM90A16PA6NEW6 464 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM90A20PA6NIJ5 464 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM90A8PA6NJQ4 464 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM90A7PA6NKC0 464 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM90A22PA8MWA6 464 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM90A12PA8MX19 464 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM90A5PA8MXJ8 464 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM90A23PA8MXZ1 464 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM25AB3EWG3 89 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM25CB3EWG5 89 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM25GB3EWG6 89 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 SLC33A1O00400 549 aaPredicted RBP10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 ADAM20O43506 726 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 PSPNO60542 156 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FCN3O75636 299 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 TPPPO94811 219 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 HNRNPCP07910 306 aaKnown RBP eCLIP10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM90A15PP0C7V4 464 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM90A13PP0C7W8 464 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM90A14PP0C7W9 464 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FAM90A24PP0C7X0 464 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 LMO1P25800 156 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 BLVRBP30043 206 aaPredicted RBP10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 PITPNBP48739 271 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 KCNJ8Q15842 424 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 PYHIN1Q6K0P9 492 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 BRICD5Q6PL45 260 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 PRSS57Q6UWY2 283 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 BAIAP2L2Q6UXY1 529 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 LINC00596Q86U02 117 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 ZNRF1Q8ND25 227 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 OR56B1Q8NGI3 324 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 POM121Q96HA1 1249 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 IFT22Q9H7X7 185 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 RCC2Q9P258 522 aaKnown RBP10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 EXTL2Q9UBQ6 330 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 GLS2Q9UI32 602 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 SIGLEC5O15389 551 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 TMPRSS2O15393 492 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 PLA2G10O15496 165 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 NDUFA2O43678 99 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 ZNF737O75373 536 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 CHRM2P08172 466 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 CHATP28329 748 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 RFX2P48378 723 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 PITPNAQ00169 270 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 IL18Q14116 193 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 PLAC9Q5JTB6 97 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 ATAD3CQ5T2N8 411 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 RAB12Q6IQ22 244 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 SPNS3Q6ZMD2 512 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 C17orf107Q6ZR85 190 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 NRARPQ7Z6K4 114 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 FGFRL1Q8N441 504 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 SUMF2Q8NBJ7 301 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 OR10R2Q8NGX6 335 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 RAB40AQ8WXH6 277 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 DNTTIP1Q9H147 329 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 ZNF665Q9H7R5 613 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 KAAG1Q9UBP8 84 aa10.12□□□□□ -0.79
TRAF3IP2-211ENST00000528599 IGHV4-61A0A0C4DH41 118 aa10.11□□□□□ -0.79
TRAF3IP2-211ENST00000528599 NKX6-3A6NJ46 265 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms