RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 ODAMA1E959 279 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 SLC33A1O00400 549 aaPredicted RBP12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 DEGS1O15121 323 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 SULT1B1O43704 296 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 ZP1P60852 638 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 BDH1Q02338 343 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 CDK5R1Q15078 307 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 KISS1Q15726 138 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 BEAN1Q3B7T3 259 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 TMEM95Q3KNT9 176 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 KRBOX4Q5JUW0 171 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 LPCAT4Q643R3 524 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 RTN4RL2Q86UN3 420 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 PARP16Q8N5Y8 322 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 OR52I1Q8NGK6 324 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 TSEN15Q8WW01 171 aaKnown RBP12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 CITED2Q99967 270 aaPredicted RBP12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 RHOFQ9HBH0 211 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 ZNF286AQ9HBT8 521 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 FAM118AQ9NWS6 357 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 DHDHQ9UQ10 334 aa12.17□□□□□ -0.46
EXOSC4-203ENST00000527954 DSCAML1Q8TD84 2053 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 TMEM212A6NML5 194 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 ALX3O95076 343 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 IGLV1-47P01700 117 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 CSN2P05814 226 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 CCDC159P0C7I6 412 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 VDAC2P45880 294 aaPredicted RBP12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 GTF2A1P52655 376 aaPredicted RBP12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 GBX2P52951 348 aaPredicted RBP12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 EMX1Q04741 257 aaPredicted RBP12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 RAB40BQ12829 278 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 MRPL28Q13084 256 aaKnown RBP12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 ATXN7L3Q14CW9 347 aaPredicted RBP12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 ZNF691Q5VV52 312 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 C10orf67Q8IYJ2 551 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 CHST4Q8NCG5 386 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 ZNF596Q8TC21 504 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 WIPF2Q8TF74 440 aaPredicted RBP12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 STMN2Q93045 179 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 R3HDM4Q96D70 268 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 NR1H4Q96RI1 486 aaPredicted RBP12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 MMP28Q9H239 520 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 PPIL3Q9H2H8 161 aaKnown RBP12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 S100A14Q9HCY8 104 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 INPP5EQ9NRR6 644 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 RPL36Q9Y3U8 105 aaKnown RBP12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 TGP01266 2768 aa12.16□□□□□ -0.46
EXOSC4-203ENST00000527954 LEUTXA8MZ59 168 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 H3BUI4 141 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 HSPB6O14558 160 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 TOR1AO14656 332 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 RPSAP08865 295 aaKnown RBP12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 PTGFRP43088 359 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 SOX2P48431 317 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 MTNR1BP49286 362 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 C17orf58Q2M2W7 97 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 KLHL22Q53GT1 634 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 UTF1Q5T230 341 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 SAMD5Q5TGI4 173 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 SATL1Q86VE3 508 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 NDUFA11Q86Y39 141 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 OR4D6Q8NGJ1 314 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 APH1BQ8WW43 257 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 OCSTAMPQ9BR26 566 aa12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 MRPS18AQ9NVS2 196 aaKnown RBP12.15□□□□□ -0.46
EXOSC4-203ENST00000527954 ZNF729A6NN14 1252 aaPredicted RBP12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 ADARB2-AS1A8MUL3 147 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 H0YJX3 145 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 GABRPO00591 440 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 PRB2P02812 416 aaPredicted RBP12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 ALDOBP05062 364 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 LIMS3P0CW19 117 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 LIMS4P0CW20 117 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 RAB3AP20336 220 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 CD34P28906 385 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 BRS3P32247 399 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 SMN1Q16637 294 aaKnown RBP12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 ZSCAN26Q16670 478 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 HLA-DRB5Q30154 266 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 FBLN7Q53RD9 439 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 TPTE2P1Q5T6R2 138 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 PQLC1Q8N2U9 271 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 OR51A2Q8NGJ7 313 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 TNFAIP8L1Q8WVP5 186 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 RGP1Q92546 391 aaPredicted RBP12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 GPER1Q99527 375 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 TAS2R4Q9NYW5 299 aa12.14□□□□□ -0.47
EXOSC4-203ENST00000527954 BUB1B-PAK6H3BSN5 160 aa12.13□□□□□ -0.47
EXOSC4-203ENST00000527954 MAGEB3O15480 346 aa12.13□□□□□ -0.47
EXOSC4-203ENST00000527954 NFYBP25208 207 aa12.13□□□□□ -0.47
EXOSC4-203ENST00000527954 CEACAM3P40198 252 aa12.13□□□□□ -0.47
EXOSC4-203ENST00000527954 OR3A4PP47883 348 aa12.13□□□□□ -0.47
EXOSC4-203ENST00000527954 PRRX1P54821 245 aa12.13□□□□□ -0.47
EXOSC4-203ENST00000527954 RBM39Q14498 530 aaKnown RBP12.13□□□□□ -0.47
EXOSC4-203ENST00000527954 PAN3Q58A45 887 aaKnown RBP12.13□□□□□ -0.47
EXOSC4-203ENST00000527954 OXLD1Q5BKU9 147 aa12.13□□□□□ -0.47
EXOSC4-203ENST00000527954 KPRPQ5T749 579 aaPredicted RBP12.13□□□□□ -0.47
EXOSC4-203ENST00000527954 XAF1Q6GPH4 301 aa12.13□□□□□ -0.47
EXOSC4-203ENST00000527954 ELP2Q6IA86 826 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms