RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 OR8H3Q8N146 312 aa9.62□□□□□ -0.87
SRPRA-202ENST00000527817 CCDC54Q8NEL0 328 aa9.62□□□□□ -0.87
SRPRA-202ENST00000527817 DNAAF1Q8NEP3 725 aa9.62□□□□□ -0.87
SRPRA-202ENST00000527817 HMG20AQ9NP66 347 aa9.62□□□□□ -0.87
SRPRA-202ENST00000527817 KBTBD11-OT1A0A1B0GTJ5 212 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 ODAMA1E959 279 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 SIRPB1O00241 398 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 CSN2P05814 226 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 PRKACAP17612 351 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 BCL3P20749 454 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 ATP6V1B2P21281 511 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 RBP2P50120 134 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 RAB7AP51149 207 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 ATP1B3P54709 279 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 CXCR4P61073 352 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 FAM27D1Q5T7N8 215 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 ZNF429Q86V71 674 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 TGIF2LXQ8IUE1 241 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 HAVCR2Q8TDQ0 301 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 C4orf3Q8WVX3 66 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 C10orf35Q96D05 121 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 MNTQ99583 582 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 TEX12Q9BXU0 123 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 TTTY10Q9BZA0 68 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 CHST5Q9GZS9 411 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 ABCG5Q9H222 651 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 PLEKHA1Q9HB21 404 aa9.61□□□□□ -0.87
SRPRA-202ENST00000527817 EXOSC4Q9NPD3 245 aaKnown RBP9.61□□□□□ -0.87
SRPRA-202ENST00000527817 MAGEB4O15481 346 aaPredicted RBP9.6□□□□□ -0.87
SRPRA-202ENST00000527817 SYT7O43581 403 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 SASH3O75995 380 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 IGKV1D-33P01593 117 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 IGKV1-33P01594 117 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 IGHG4P01861 327 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 FRMD6-AS1P0C7T7 363 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 CALCBP10092 127 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 NFYBP25208 207 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 GPR12P47775 334 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 MADCAM1Q13477 382 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 DIAPH2-AS1Q14236 149 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 FAM98BQ52LJ0 330 aaKnown RBP9.6□□□□□ -0.87
SRPRA-202ENST00000527817 KRBOX4Q5JUW0 171 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 TMEM236Q5W0B7 351 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 OVCH2Q7RTZ1 564 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 OR11H1Q8NG94 326 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 KIRREL1Q96J84 757 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 COMMD4Q9H0A8 199 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 LINC00574Q9H8X3 128 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 SLC25A19Q9HC21 320 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 LIN7CQ9NUP9 197 aaKnown RBP9.6□□□□□ -0.87
SRPRA-202ENST00000527817 OR6C3Q9NZP0 311 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 MRM2Q9UI43 246 aaKnown RBP9.6□□□□□ -0.87
SRPRA-202ENST00000527817 GSTK1Q9Y2Q3 226 aa9.6□□□□□ -0.87
SRPRA-202ENST00000527817 SNU13P55769 128 aaKnown RBP9.59□□□□□ -0.87
SRPRA-202ENST00000527817 CFHR3Q02985 330 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 PDZK1IP1Q13113 114 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 C16orf89Q6UX73 402 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 PLEKHG7Q6ZR37 379 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 SLC16A12Q6ZSM3 486 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 TMEM179BQ7Z7N9 219 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 CATSPERDQ86XM0 798 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 DEFB107AQ8IZN7 70 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 ZNF565Q8N9K5 539 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 PP6455Q8WZ26 134 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 RNFT2Q96EX2 444 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 COQ2Q96H96 371 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 CNN2Q99439 309 aaKnown RBP9.59□□□□□ -0.87
SRPRA-202ENST00000527817 TM2D3Q9BRN9 247 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 NCOR1P1Q9H4R4 102 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 ZNF556Q9HAH1 456 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 EDA2RQ9HAV5 297 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 KRT84Q9NSB2 600 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 NDE1Q9NXR1 346 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 TVP23BQ9NYZ1 205 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 PSG11Q9UQ72 335 aa9.59□□□□□ -0.87
SRPRA-202ENST00000527817 HYDINQ4G0P3 5121 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 NCBP2LA6PVI3 153 aaKnown RBP9.58□□□□□ -0.88
SRPRA-202ENST00000527817 MPZL2O60487 215 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 CST1P01037 141 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 HCKP08631 526 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 OR8U8P0C7N1 319 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 PSMB8P28062 276 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 VEGFCP49767 419 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 MTCP1P56278 107 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 RUNX1Q01196 453 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 ZNF816Q0VGE8 651 aaPredicted RBP9.58□□□□□ -0.88
SRPRA-202ENST00000527817 ODF4Q2M2E3 257 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 Q6P435 159 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 ADAMTSL5Q6ZMM2 481 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 DHFR2Q86XF0 187 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 SLC35F2Q8IXU6 374 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 Q8N6K4 173 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 Q8N9W7 124 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 CHST4Q8NCG5 386 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 EAF1Q96JC9 268 aaPredicted RBP9.58□□□□□ -0.88
SRPRA-202ENST00000527817 ELAC2Q9BQ52 826 aaKnown RBP9.58□□□□□ -0.88
SRPRA-202ENST00000527817 ADI1Q9BV57 179 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 RHOFQ9HBH0 211 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 CLN6Q9NWW5 311 aa9.58□□□□□ -0.88
SRPRA-202ENST00000527817 IDI2-AS1Q9NZ38 188 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms