RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 FAM90A12PA8MX19 464 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 FAM90A5PA8MXJ8 464 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 OR2H2O95918 312 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 FAM90A15PP0C7V4 464 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 FAM90A13PP0C7W8 464 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 FAM90A14PP0C7W9 464 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 FAM90A24PP0C7X0 464 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 LMO1P25800 156 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 OR3A4PP47883 348 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 POU3F4P49335 361 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 DGCR2P98153 550 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 OR2W3Q7Z3T1 314 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 OR4D6Q8NGJ1 314 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 CHPT1Q8WUD6 406 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 P2RX4Q99571 388 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 GSTK1Q9Y2Q3 226 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 MOB4Q9Y3A3 225 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 HSPE1-MOB4S4R3N1 261 aa12.75□□□□□ -0.37
PTPRU-210ENST00000527027 IGKV1-9A0A0C4DH69 117 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 A0A1W2PQL4 384 aaPredicted RBP12.74□□□□□ -0.37
PTPRU-210ENST00000527027 ODAMA1E959 279 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 NUDT19A8MXV4 375 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 SULT1C4O75897 302 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 OR2T7P0C7T2 308 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 PRKACBP22694 351 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 FASP25445 335 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 PTGFRP43088 359 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 PDZK1IP1Q13113 114 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 RBM39Q14498 530 aaKnown RBP12.74□□□□□ -0.37
PTPRU-210ENST00000527027 C18orf65Q6ZTR6 163 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 C8orf86Q6ZUL3 223 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 GID4Q8IVV7 300 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 RDH10Q8IZV5 341 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 PRSS35Q8N3Z0 413 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 NOL4LQ96MY1 436 aaPredicted RBP12.74□□□□□ -0.37
PTPRU-210ENST00000527027 IL4I1Q96RQ9 567 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 WARS2Q9UGM6 360 aaKnown RBP12.74□□□□□ -0.37
PTPRU-210ENST00000527027 U3KQK5 164 aa12.74□□□□□ -0.37
PTPRU-210ENST00000527027 STAB2Q8WWQ8 2551 aa12.73□□□□□ -0.37
PTPRU-210ENST00000527027 LOC107986453A0A1B0GWG9 222 aa12.73□□□□□ -0.37
PTPRU-210ENST00000527027 ANKRD65E5RJM6 399 aa12.73□□□□□ -0.37
PTPRU-210ENST00000527027 RAMP3O60896 148 aa12.73□□□□□ -0.37
PTPRU-210ENST00000527027 UBCP0CG48 685 aaKnown RBP12.73□□□□□ -0.37
PTPRU-210ENST00000527027 ATF1P18846 271 aa12.73□□□□□ -0.37
PTPRU-210ENST00000527027 EPHA2P29317 976 aa12.73□□□□□ -0.37
PTPRU-210ENST00000527027 C12orf73Q69YU5 71 aa12.73□□□□□ -0.37
PTPRU-210ENST00000527027 LHFPL2Q6ZUX7 228 aa12.73□□□□□ -0.37
PTPRU-210ENST00000527027 UTS2BQ765I0 119 aa12.73□□□□□ -0.37
PTPRU-210ENST00000527027 TFAP2CQ92754 450 aa12.73□□□□□ -0.37
PTPRU-210ENST00000527027 ADAT3Q96EY9 351 aaPredicted RBP12.73□□□□□ -0.37
PTPRU-210ENST00000527027 COMMD4Q9H0A8 199 aa12.73□□□□□ -0.37
PTPRU-210ENST00000527027 S100A14Q9HCY8 104 aa12.73□□□□□ -0.37
PTPRU-210ENST00000527027 PCDHB16Q9NRJ7 776 aa12.73□□□□□ -0.37
PTPRU-210ENST00000527027 KIAA2026Q5HYC2 2103 aa12.73□□□□□ -0.37
PTPRU-210ENST00000527027 IGKV1-12A0A0C4DH73 117 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 ZNF729A6NN14 1252 aaPredicted RBP12.72□□□□□ -0.37
PTPRU-210ENST00000527027 ZAR1LA6NP61 321 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 SERPINE3A8MV23 424 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 IGKV1D-12P01611 117 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 CSN2P05814 226 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 SNRNP70P08621 437 aaKnown RBP12.72□□□□□ -0.37
PTPRU-210ENST00000527027 ZNF44P15621 663 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 GP2P55259 537 aaKnown RBP12.72□□□□□ -0.37
PTPRU-210ENST00000527027 SLC35B1P78383 322 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 SCN1BQ07699 218 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 C17orf58Q2M2W7 97 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 KRBOX4Q5JUW0 171 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 UTF1Q5T230 341 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 COMMD1Q8N668 190 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 KLHL30-AS1Q8NEE0 82 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 OR9G1Q8NH87 305 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 RPEQ96AT9 228 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 SPSB1Q96BD6 273 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 FGGYQ96C11 551 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 COQ2Q96H96 371 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 OR6C3Q9NZP0 311 aa12.72□□□□□ -0.37
PTPRU-210ENST00000527027 KBTBD11-OT1A0A1B0GTJ5 212 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 MITFO75030 526 aaPredicted RBP12.71□□□□□ -0.37
PTPRU-210ENST00000527027 KDM4BO94953 1096 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 CGB3P0DN86 165 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 CGB7P0DN87 165 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 NFYBP25208 207 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 KIR3DL2P43630 455 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 TMEM244Q5VVB8 128 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 Q6P435 159 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 ZNF695Q8IW36 515 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 C5orf56Q8N8D9 126 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 CHST4Q8NCG5 386 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 OR10H4Q8NGA5 316 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 OR56B4Q8NH76 319 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 TOMM40LQ969M1 308 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 RFT1Q96AA3 541 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 KIRREL1Q96J84 757 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 DCLRE1BQ9H816 532 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 RHOFQ9HBH0 211 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 KRT84Q9NSB2 600 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 ING3Q9NXR8 418 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 LINC00527Q9UJ94 153 aa12.71□□□□□ -0.37
PTPRU-210ENST00000527027 AMMECR1Q9Y4X0 333 aaPredicted RBP12.71□□□□□ -0.37
PTPRU-210ENST00000527027 LSM4Q9Y4Z0 139 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms