RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 CA3P07451 260 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 NMBP08949 121 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 OR13C7P0DN81 318 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 CD79AP11912 226 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 MGMTP16455 207 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 TAC1P20366 129 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 OMGP23515 440 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 KDELR1P24390 212 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 ADORA2BP29275 332 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 IL2RGP31785 369 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 CLDN12P56749 244 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 TBPL1P62380 186 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 PSG5Q15238 335 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 UBE2SQ16763 222 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 DGUOKQ16854 277 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 CARD16Q5EG05 197 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 TPRG1LQ5T0D9 272 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 C10orf91Q5T1B1 145 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 TMEM107Q6UX40 140 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 AHSA2Q719I0 299 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 C10orf107Q8IVU9 208 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 C8orf59Q8N0T1 100 aaPredicted RBP2.71□□□□□ -1.98
CD44-217ENST00000525348 KIR2DL5AQ8N109 375 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 TMEM123Q8N131 208 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 MS4A15Q8N5U1 240 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 METTL13Q8N6R0 699 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 C8orf31Q8N9H6 132 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 UBAC2Q8NBM4 344 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 ATP6V1C2Q8NEY4 427 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 OR1L4Q8NGR5 311 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 OR13C4Q8NGS5 318 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 OR13C8Q8NGS7 320 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 OR6N1Q8NGY5 312 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 OR2G2Q8NGZ5 317 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 OR52E5Q8NH55 327 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 KIR2DL5BQ8NHK3 375 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 LYPD6BQ8NI32 183 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 M1APQ8TC57 530 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 FAM110BQ8TC76 370 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 LCN9Q8WX39 176 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 CMBLQ96DG6 245 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 CCDC126Q96EE4 140 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 MALSU1Q96EH3 234 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 TBX5Q99593 518 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 SLC6A7Q99884 636 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 C20orf144Q9BQM9 153 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 TIMM29Q9BSF4 260 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 FAAP24Q9BTP7 215 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 WRAP53Q9BUR4 548 aaKnown RBP2.71□□□□□ -1.98
CD44-217ENST00000525348 FUNDC2Q9BWH2 189 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 ZNF436Q9C0F3 470 aaPredicted RBP2.71□□□□□ -1.98
CD44-217ENST00000525348 ABCG5Q9H222 651 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 PPDPFQ9H3Y8 114 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 DHX35Q9H5Z1 703 aaKnown RBP2.71□□□□□ -1.98
CD44-217ENST00000525348 VPS29Q9UBQ0 182 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 RAB22AQ9UL26 194 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 HHLA2Q9UM44 414 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 FOXJ3Q9UPW0 622 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 UFC1Q9Y3C8 167 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 TONSLQ96HA7 1378 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 CCDC88AQ3V6T2 1871 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 ANKRD26Q9UPS8 1709 aa2.71□□□□□ -1.98
CD44-217ENST00000525348 ZNF638Q14966 1978 aaKnown RBP2.7□□□□□ -1.98
CD44-217ENST00000525348 C5P01031 1676 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 USP54Q70EL1 1684 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 CRB1P82279 1406 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 ANKARQ7Z5J8 1434 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 ABCC6O95255 1503 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 TRAV30A0A087WSZ9 112 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 A0A087WUJ7 227 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 TGIF2-C20orf24A0A0A6YYL0 155 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 NPIPA5A0A0B4J1W7 369 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 TRAV39A0A0B4J263 110 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 A0A1W2PPV9 198 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 NKX2-6A6NCS4 301 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 EPOPA6NHQ4 379 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 ZNF878C9JN71 531 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 D6RAR5 112 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 NPIPA5E9PKD4 350 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 K7ERU9 68 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 CORTO00230 105 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 MANBAO00462 879 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 SSNA1O43805 119 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 GNG7O60262 68 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 LYPD3O95274 346 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 MPZL1O95297 269 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 ETHE1O95571 254 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 LALBAP00709 142 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 APOC3P02656 99 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 GAPDHP04406 335 aaKnown RBP2.7□□□□□ -1.98
CD44-217ENST00000525348 DCNP07585 359 aaKnown RBP2.7□□□□□ -1.98
CD44-217ENST00000525348 CTSLP07711 333 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 WNT2P09544 360 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 CT62P0C5K7 136 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 PET100P0DJ07 73 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 ZNF35P13682 527 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 FGF7P21781 194 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 NAPAP54920 295 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 UBE2KP61086 200 aa2.7□□□□□ -1.98
CD44-217ENST00000525348 HBA1P69905 142 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms