RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 RAB31Q13636 194 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 ATP6AP1LQ52LC2 224 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 CLEC18BQ6UXF7 455 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 MDP1Q86V88 176 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 GPR26Q8NDV2 337 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 LFNGQ8NES3 379 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 ENKURQ8TC29 256 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 DCAKDQ8WVC6 231 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 NELFBQ8WX92 580 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 CDS1Q92903 461 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 ZMYND19Q96E35 227 aaPredicted RBP1.56□□□□□ -2.16
COPB1-203ENST00000525214 GPR82Q96P67 336 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 ALS2CR12Q96Q35 445 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 PITX2Q99697 317 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 C20orf144Q9BQM9 153 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 ZNF426Q9BUY5 554 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 NXF2Q9GZY0 626 aaKnown RBP1.56□□□□□ -2.16
COPB1-203ENST00000525214 IFT46Q9NQC8 304 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 IMP3Q9NV31 184 aaKnown RBP1.56□□□□□ -2.16
COPB1-203ENST00000525214 SNX24Q9Y343 169 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 PPIL1Q9Y3C6 166 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 ORC6Q9Y5N6 252 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 ELP1O95163 1332 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 ABCB11O95342 1321 aa1.56□□□□□ -2.16
COPB1-203ENST00000525214 POLR3AO14802 1390 aaPredicted RBP1.56□□□□□ -2.16
COPB1-203ENST00000525214 BRCA1P38398 1863 aaKnown RBP1.56□□□□□ -2.16
COPB1-203ENST00000525214 RPRD2Q5VT52 1461 aaKnown RBP1.56□□□□□ -2.16
COPB1-203ENST00000525214 LTBP2Q14767 1821 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 SMIM26A0A096LP01 95 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 SMIM23A6NLE4 172 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 C9J4A7 227 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 KLRC4-KLRK1H3BQV0 150 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 COCHO43405 550 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 SYNGR1O43759 233 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 OR7C2O60412 319 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 SHOX2O60902 331 aaPredicted RBP1.55□□□□□ -2.16
COPB1-203ENST00000525214 PSIP1O75475 530 aaKnown RBP1.55□□□□□ -2.16
COPB1-203ENST00000525214 FSTL3O95633 263 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 IGLV2-8P01709 118 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 HLA-AP01891 365 aaKnown RBP1.55□□□□□ -2.16
COPB1-203ENST00000525214 ORM1P02763 201 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 MT-ND4P03905 459 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 OCM2P0CE71 109 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 PAX6P26367 422 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 POLR2IP36954 125 aaKnown RBP1.55□□□□□ -2.16
COPB1-203ENST00000525214 STC1P52823 247 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 BLVRAP53004 296 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 SLC18A1P54219 525 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 RAB8AP61006 207 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 RPL10AP62906 217 aaKnown RBP1.55□□□□□ -2.16
COPB1-203ENST00000525214 BAXQ07812 192 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 ZNHIT3Q15649 155 aaPredicted RBP1.55□□□□□ -2.16
COPB1-203ENST00000525214 CEACAM21Q3KPI0 293 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 SLC25A35Q3KQZ1 300 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 SLC36A2Q495M3 483 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 TMEM236Q5W0B7 351 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 NIPAL1Q6NVV3 410 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 OPN5Q6U736 354 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 BOD1L2Q8IYS8 172 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 CYP4Z2PQ8N1L4 340 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 FAM45AQ8TCE6 357 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 DYNC2LI1Q8TCX1 351 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 RNASEH2CQ8TDP1 164 aaKnown RBP1.55□□□□□ -2.16
COPB1-203ENST00000525214 S100PBPQ96BU1 408 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 METTL26Q96S19 204 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 TMEM243Q9BU79 118 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 TSGA10Q9BZW7 698 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 API5Q9BZZ5 524 aaKnown RBP1.55□□□□□ -2.16
COPB1-203ENST00000525214 RHOFQ9HBH0 211 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 RDH14Q9HBH5 336 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 SDHAF3Q9NRP4 125 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 DDIT4Q9NX09 232 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 COMMD9Q9P000 198 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 PRO0628Q9UI54 55 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 NAGKQ9UJ70 344 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 FBXL3Q9UKT7 428 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 SCML1Q9UN30 329 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 MAP3K5Q99683 1374 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 NUP153P49790 1475 aaKnown RBP1.55□□□□□ -2.16
COPB1-203ENST00000525214 ZNF608Q9ULD9 1512 aaPredicted RBP1.55□□□□□ -2.16
COPB1-203ENST00000525214 CACNA1GO43497 2377 aa1.55□□□□□ -2.16
COPB1-203ENST00000525214 GOLGA8KD6RF30 607 aa1.54□□□□□ -2.16
COPB1-203ENST00000525214 FTCDNL1E5RQL4 147 aa1.54□□□□□ -2.16
COPB1-203ENST00000525214 E7EQL1 145 aa1.54□□□□□ -2.16
COPB1-203ENST00000525214 GOLGA8MH3BSY2 632 aa1.54□□□□□ -2.16
COPB1-203ENST00000525214 PHYHO14832 338 aa1.54□□□□□ -2.16
COPB1-203ENST00000525214 CYTH3O43739 400 aa1.54□□□□□ -2.16
COPB1-203ENST00000525214 NDUFS5O43920 106 aa1.54□□□□□ -2.16
COPB1-203ENST00000525214 SERPINB7O75635 380 aa1.54□□□□□ -2.16
COPB1-203ENST00000525214 GATBO75879 557 aaKnown RBP1.54□□□□□ -2.16
COPB1-203ENST00000525214 APOEP02649 317 aa1.54□□□□□ -2.16
COPB1-203ENST00000525214 OR4Q2P0C623 313 aa1.54□□□□□ -2.16
COPB1-203ENST00000525214 LIMS3P0CW19 117 aa1.54□□□□□ -2.16
COPB1-203ENST00000525214 LIMS4P0CW20 117 aa1.54□□□□□ -2.16
COPB1-203ENST00000525214 RD3LP0DJH9 198 aa1.54□□□□□ -2.16
COPB1-203ENST00000525214 HIST1H1CP16403 213 aaKnown RBP1.54□□□□□ -2.16
COPB1-203ENST00000525214 PVALBP20472 110 aaPredicted RBP1.54□□□□□ -2.16
COPB1-203ENST00000525214 F8A1P23610 371 aa1.54□□□□□ -2.16
COPB1-203ENST00000525214 GCLMP48507 274 aa1.54□□□□□ -2.16
COPB1-203ENST00000525214 RPL14P50914 215 aaKnown RBP1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms