RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 MRGPRDQ8TDS7 321 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 CCDC107Q8WV48 283 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 PHYHIPQ92561 330 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 TAF15Q92804 592 aaKnown RBP eCLIP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 LHX4Q969G2 390 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 DACT3Q96B18 629 aaPredicted RBP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 FAM3DQ96BQ1 224 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 C12orf43Q96C57 262 aaKnown RBP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 RBMXL1Q96E39 390 aaKnown RBP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 SDSLQ96GA7 329 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 COQ2Q96H96 371 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 WDFY2Q96P53 400 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 DUX5Q96PT3 197 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 TBX15Q96SF7 602 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 HDHD3Q9BSH5 251 aaPredicted RBP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 FAAP24Q9BTP7 215 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 MRI1Q9BV20 369 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 BEX2Q9BXY8 128 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 MRPS26Q9BYN8 205 aaKnown RBP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 SHARPINQ9H0F6 387 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 ZMAT3Q9HA38 289 aaKnown RBP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 LIN7BQ9HAP6 207 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 TNFRSF19Q9NS68 423 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNRD1Q9P1U0 126 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 KAAG1Q9UBP8 84 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 DAPK2Q9UIK4 370 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 KIF25Q9UIL4 384 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 ELF5Q9UKW6 265 aaPredicted RBP3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 PEX16Q9Y5Y5 336 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 PLCE1Q9P212 2302 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 CCDC168Q8NDH2 2452 aa3.79□□□□□ -1.8
CHMP4A-202ENST00000524955 CR1P17927 2039 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 CHD3Q12873 2000 aaKnown RBP3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 TANC2Q9HCD6 1990 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 A0A075B6Q4 140 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 MEIKINA0A087WXM9 373 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 TRAV1-2A0A0B4J238 106 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 TMEM272A0A1B0GTI8 110 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 MEGF11A6BM72 1044 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 IFITM5A6NNB3 132 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 TMEM14DPA8MWL7 114 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 PDCD5O14737 125 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 MGST3O14880 152 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 CRLF1O75462 422 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 FSTL3O95633 263 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 FCER2P06734 321 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 LIPFP07098 398 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 PTHLHP12272 177 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 ARSBP15848 533 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 FGF9P31371 208 aaPredicted RBP3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 RPS19P39019 145 aaKnown RBP3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 GLP1RP43220 463 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 ALDH3B2P48448 385 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 SERPINB10P48595 397 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 NPY4RP50391 375 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 BMXP51813 675 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 RPS27AP62979 156 aaKnown RBP3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 QRFPP83859 136 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 PAX8Q06710 450 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 SPCS2Q15005 226 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF146Q15072 292 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 CHRFAM7AQ494W8 412 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 PLA1AQ53H76 456 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 KRBOX4Q5JUW0 171 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 SPIN3Q5JUX0 258 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 CD276Q5ZPR3 534 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 ELP2Q6IA86 826 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 RAB12Q6IQ22 244 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 C6orf201Q7Z4U5 140 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 GPR141Q7Z602 305 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 CLVS1Q8IUQ0 354 aaPredicted RBP3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 OR8H2Q8N162 312 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 PRR18Q8N4B5 295 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 LY6G5BQ8NDX9 201 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 OR6M1Q8NGM8 313 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 OR13A1Q8NGR1 328 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 OR4K15Q8NH41 348 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 LGALS14Q8TCE9 139 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 C17orf50Q8WW18 174 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 MAFIPQ8WZ33 124 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 THRSPQ92748 146 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 LEAP2Q969E1 77 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 FOXRED1Q96CU9 486 aaPredicted RBP3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 CPNE2Q96FN4 548 aaPredicted RBP3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 SNX22Q96L94 193 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 Q96M66 194 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 KCTD7Q96MP8 289 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 SLC6A7Q99884 636 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 UQCC2Q9BRT2 126 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 DPCDQ9BVM2 203 aaPredicted RBP3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 TMEM59Q9BXS4 323 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 BARHL1Q9BZE3 327 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 SIRPDQ9H106 197 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 DNTTIP1Q9H147 329 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 LPAR5Q9H1C0 372 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 OCEL1Q9H607 264 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF69Q9UC07 566 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 STEAP1Q9UHE8 339 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 GLS2Q9UI32 602 aa3.78□□□□□ -1.8
CHMP4A-202ENST00000524955 HIVEP1P15822 2718 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms