RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 UBE2UQ5VVX9 321 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 GLT8D1Q68CQ7 371 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 NCR3LG1Q68D85 454 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 AWAT2Q6E213 333 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 ZNF773Q6PK81 442 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 BRD3OSQ6XYD6 125 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 TMEM91Q6ZNR0 172 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 OSR2Q8N2R0 312 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 TMEM158Q8WZ71 300 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 FOXRED1Q96CU9 486 aaPredicted RBP10.28□□□□□ -0.76
CCNC-216ENST00000523961 ST3GAL6Q9Y274 331 aa10.28□□□□□ -0.76
CCNC-216ENST00000523961 SLC33A1O00400 549 aaPredicted RBP10.27□□□□□ -0.77
CCNC-216ENST00000523961 VENTXO95231 258 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 CSN2P05814 226 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 ZNF728P0DKX0 622 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 GTF2F2P13984 249 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 CCL3L1P16619 93 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 P2RX3P56373 397 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 RBM11P57052 281 aaKnown RBP10.27□□□□□ -0.77
CCNC-216ENST00000523961 FABP5Q01469 135 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 ZNF273Q14593 569 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 SSX1Q16384 188 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 PIGYQ3MUY2 71 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 RUSC1-AS1Q66K80 236 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 GLIPR1L1Q6UWM5 242 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 LINC00596Q86U02 117 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 LRRTM1Q86UE6 522 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 LYPD6Q86Y78 171 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 SIGLECL1Q8N7X8 197 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 TNFRSF14Q92956 283 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 MRPS24Q96EL2 167 aaKnown RBP10.27□□□□□ -0.77
CCNC-216ENST00000523961 PPIL3Q9H2H8 161 aaKnown RBP10.27□□□□□ -0.77
CCNC-216ENST00000523961 PPA2Q9H2U2 334 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 HEXA-AS1Q9H8Q6 139 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 GHRLQ9UBU3 117 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 LINC00312Q9Y6C7 94 aa10.27□□□□□ -0.77
CCNC-216ENST00000523961 SVEP1Q4LDE5 3571 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 RNF212BA8MTL3 300 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 C17orf98A8MV24 154 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 RNASEK-C17orf49H0YIS7 233 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 RBP4P02753 201 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 PSMB9P28065 219 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 KCNJ3P48549 501 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 UBE2E1P51965 193 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 ERVFRD-1P60508 538 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 SRSF2Q01130 221 aaKnown RBP10.26□□□□□ -0.77
CCNC-216ENST00000523961 MPV17LQ2QL34 196 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 PAN3Q58A45 887 aaKnown RBP10.26□□□□□ -0.77
CCNC-216ENST00000523961 PDZD9Q8IXQ8 264 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 C11orf42Q8N5U0 333 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 TPRX1Q8N7U7 411 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 OR4D6Q8NGJ1 314 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 ZFAND2BQ8WV99 257 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 ZNF48Q96MX3 618 aaPredicted RBP10.26□□□□□ -0.77
CCNC-216ENST00000523961 ZNF714Q96N38 554 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 IFT22Q9H7X7 185 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 NDUFB11Q9NX14 153 aa10.26□□□□□ -0.77
CCNC-216ENST00000523961 TRGV10A0A0A0MS01 117 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 TRAV24A0A0B4J272 114 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 A0A1W2PP11 408 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 TRIM77I1YAP6 450 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 CCRL2O00421 344 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 OR7C1O76099 320 aaPredicted RBP10.25□□□□□ -0.77
CCNC-216ENST00000523961 UBBP0CG47 229 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 CD37P11049 281 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 DLX1P56177 255 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 DLX6P56179 175 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 AESQ08117 197 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 KLRD1Q13241 179 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 DEFB112Q30KQ8 113 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 KRTAP24-1Q3LI83 254 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 KRBOX4Q5JUW0 171 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 C1orf100Q5SVJ3 147 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 CD200R1LQ6Q8B3 271 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 TRAPPC6BQ86SZ2 158 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 C1orf147Q96MC9 270 aaPredicted RBP10.25□□□□□ -0.77
CCNC-216ENST00000523961 MDFIQ99750 246 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 PRDM13Q9H4Q3 707 aa10.25□□□□□ -0.77
CCNC-216ENST00000523961 UBE2J1Q9Y385 318 aaPredicted RBP10.25□□□□□ -0.77
CCNC-216ENST00000523961 SOX21Q9Y651 276 aaPredicted RBP10.25□□□□□ -0.77
CCNC-216ENST00000523961 TRDV1A0A1B0GX56 115 aa10.24□□□□□ -0.77
CCNC-216ENST00000523961 ODAMA1E959 279 aa10.24□□□□□ -0.77
CCNC-216ENST00000523961 MEX3AA1L020 520 aaKnown RBP10.24□□□□□ -0.77
CCNC-216ENST00000523961 HSPB6O14558 160 aa10.24□□□□□ -0.77
CCNC-216ENST00000523961 GEMIN2O14893 280 aaKnown RBP10.24□□□□□ -0.77
CCNC-216ENST00000523961 NPFFO15130 113 aa10.24□□□□□ -0.77
CCNC-216ENST00000523961 MGMTP16455 207 aa10.24□□□□□ -0.77
CCNC-216ENST00000523961 GALP22466 123 aa10.24□□□□□ -0.77
CCNC-216ENST00000523961 CALRP27797 417 aaKnown RBP10.24□□□□□ -0.77
CCNC-216ENST00000523961 HTR2CP28335 458 aa10.24□□□□□ -0.77
CCNC-216ENST00000523961 RANBP1P43487 201 aa10.24□□□□□ -0.77
CCNC-216ENST00000523961 GLIPR1P48060 266 aa10.24□□□□□ -0.77
CCNC-216ENST00000523961 PSMD7P51665 324 aa10.24□□□□□ -0.77
CCNC-216ENST00000523961 PRB3Q04118 309 aaPredicted RBP10.24□□□□□ -0.77
CCNC-216ENST00000523961 BAMBIQ13145 260 aa10.24□□□□□ -0.77
CCNC-216ENST00000523961 ATXN7L3Q14CW9 347 aaPredicted RBP10.24□□□□□ -0.77
CCNC-216ENST00000523961 TAF9Q16594 264 aa10.24□□□□□ -0.77
CCNC-216ENST00000523961 HCP5Q6MZN7 132 aa10.24□□□□□ -0.77
CCNC-216ENST00000523961 TCF23Q7RTU1 214 aa10.24□□□□□ -0.77
CCNC-216ENST00000523961 ZDHHC22Q8N966 263 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms