RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 HIGD2AQ9BW72 106 aa1.78□□□□□ -2.12
PCM1-219ENST00000523540 ZNF436Q9C0F3 470 aaPredicted RBP1.78□□□□□ -2.12
PCM1-219ENST00000523540 ANKHQ9HCJ1 492 aa1.78□□□□□ -2.12
PCM1-219ENST00000523540 FADS3Q9Y5Q0 445 aa1.78□□□□□ -2.12
PCM1-219ENST00000523540 V9GYY5 206 aaPredicted RBP1.78□□□□□ -2.12
PCM1-219ENST00000523540 DOCK6Q96HP0 2047 aa1.78□□□□□ -2.13
PCM1-219ENST00000523540 AK9Q5TCS8 1911 aa1.78□□□□□ -2.13
PCM1-219ENST00000523540 IGKV1D-37A0A075B6S9 117 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 A0A1B0GXF2 115 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 CETN3O15182 167 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 SPOPO43791 374 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 OTCP00480 354 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 S100A9P06702 114 aaKnown RBP1.77□□□□□ -2.13
PCM1-219ENST00000523540 CECR9P0C854 216 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 GTF2F2P13984 249 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 CTLA4P16410 223 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 M6PRP20645 277 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 LGALS7P47929 136 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 ATP5J2P56134 94 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 BNIP2Q12982 314 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 WDR43Q15061 677 aaKnown RBP eCLIP1.77□□□□□ -2.13
PCM1-219ENST00000523540 TPGS1Q6ZTW0 290 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 MARCH3Q86UD3 253 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 CYP4Z1Q86W10 505 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 ZNF738Q8NE65 137 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 OR6K3Q8NGY3 331 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 CACNG8Q8WXS5 425 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 MAL2Q969L2 176 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 RAD51AP1Q96B01 352 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 FMC1Q96HJ9 113 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 C20orf166-AS1Q96NR2 134 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 TM6SF2Q9BZW4 377 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 SYT4Q9H2B2 425 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 POMKQ9H5K3 350 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 SDHAF2Q9NX18 166 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 UBAP1Q9NZ09 502 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 VAPAQ9P0L0 249 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 SLC22A14Q9Y267 594 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 CHTOPQ9Y3Y2 248 aaKnown RBP1.77□□□□□ -2.13
PCM1-219ENST00000523540 U3KQK5 164 aa1.77□□□□□ -2.13
PCM1-219ENST00000523540 TNIKQ9UKE5 1360 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 NRCAMQ92823 1304 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 GSTTP1A0A1W2PQM5 241 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 RBFOX3A6NFN3 312 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 NPPAP01160 153 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 XKP51811 444 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 CCL23P55773 120 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 CTAG1AP78358 180 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 CASP8Q14790 479 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 ACTBL2Q562R1 376 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 ERICH5Q6P6B1 374 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 LYZL2Q7Z4W2 148 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 SPATA24Q86W54 205 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 KRT222Q8N1A0 295 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 OR13C9Q8NGT0 318 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 DOK4Q8TEW6 326 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 BLNKQ8WV28 456 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 C8orf76Q96K31 380 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 VAT1Q99536 393 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 BEX2Q9BXY8 128 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 NXF2Q9GZY0 626 aaKnown RBP1.76□□□□□ -2.13
PCM1-219ENST00000523540 OR5V1Q9UGF6 321 aa1.76□□□□□ -2.13
PCM1-219ENST00000523540 C14orf166Q9Y224 244 aaKnown RBP1.76□□□□□ -2.13
PCM1-219ENST00000523540 SAMHD1Q9Y3Z3 626 aaKnown RBP1.76□□□□□ -2.13
PCM1-219ENST00000523540 COL5A3P25940 1745 aaPredicted RBP1.75□□□□□ -2.13
PCM1-219ENST00000523540 MAP3K19Q56UN5 1328 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 C17orf51A8MQB3 221 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 VAPBO95292 243 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 PDYNP01213 254 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 S100A6P06703 90 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 SCGB1C2P0DMR2 95 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 CBR1P16152 277 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 PRTN3P24158 256 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 CRABP2P29373 138 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 IL12BP29460 328 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 ZNF83P51522 516 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 HADHBP55084 474 aaKnown RBP1.75□□□□□ -2.13
PCM1-219ENST00000523540 SARNPP82979 210 aaKnown RBP1.75□□□□□ -2.13
PCM1-219ENST00000523540 STK38Q15208 465 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 GUSBP1Q15486 140 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 BCL2A1Q16548 175 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 HNRNPA1L2Q32P51 320 aaKnown RBP1.75□□□□□ -2.13
PCM1-219ENST00000523540 FBXO48Q5FWF7 155 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 FAM9CQ8IZT9 166 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 SYS1Q8N2H4 156 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 TRIML2Q8N7C3 387 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 Q8NDZ9 215 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 SCGB1C1Q8TD33 95 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 KLF6Q99612 283 aaPredicted RBP1.75□□□□□ -2.13
PCM1-219ENST00000523540 SIKE1Q9BRV8 207 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 XKR8Q9H6D3 395 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 STMN3Q9NZ72 180 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 DNAJC27Q9NZQ0 273 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 STK38LQ9Y2H1 464 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 BAHCC1Q9P281 2608 aa1.75□□□□□ -2.13
PCM1-219ENST00000523540 F8VZ95 297 aa1.74□□□□□ -2.13
PCM1-219ENST00000523540 NDUFS8O00217 210 aa1.74□□□□□ -2.13
PCM1-219ENST00000523540 MYO1DO94832 1006 aa1.74□□□□□ -2.13
PCM1-219ENST00000523540 OPN1SWP03999 348 aa1.74□□□□□ -2.13
PCM1-219ENST00000523540 GABRA1P14867 456 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms