RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 FFAR1O14842 300 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 ARPC5O15511 151 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 STK16O75716 305 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 TNFSF13O75888 250 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 CA2P00918 260 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 CRHP06850 196 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 CRABP2P29373 138 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 APLNRP35414 380 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 SLC18A1P54219 525 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 H2BFSP57053 126 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 SYNJ2BPP57105 145 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 HIST1H3AP68431 136 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 SLC7A9P82251 487 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 HPCAP84074 193 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 H3F3AP84243 136 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 KRTAP15-1Q3LI76 137 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 ZNF876PQ49A33 203 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 COA6Q5JTJ3 125 aaKnown RBP3.01□□□□□ -1.93
SKP1-209ENST00000522552 SLC25A30Q5SVS4 291 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 FAM182AQ5T1J6 154 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 GSG1LQ6UXU4 331 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 CYHR1Q6ZMK1 362 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 HIST2H3AQ71DI3 136 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 C11orf53Q8IXP5 236 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 C1orf158Q8N1D5 194 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 SLC35F6Q8N357 371 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 ZNF420Q8TAQ5 688 aaPredicted RBP3.01□□□□□ -1.93
SKP1-209ENST00000522552 TNFAIP8L1Q8WVP5 186 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 RMND5BQ96G75 393 aaPredicted RBP3.01□□□□□ -1.93
SKP1-209ENST00000522552 CGREF1Q99674 301 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 PRSS27Q9BQR3 290 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 TMEM243Q9BU79 118 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 RBM12B-AS1Q9P1G2 102 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 RWDD2AQ9UIY3 292 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 PSG8Q9UQ74 426 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 YTHDF2Q9Y5A9 579 aaKnown RBP3.01□□□□□ -1.93
SKP1-209ENST00000522552 SYNMO15061 1565 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 PTPRKQ15262 1439 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 NCOA1Q15788 1441 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 WDR62O43379 1518 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 THSD7BQ9C0I4 1608 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 MYH3P11055 1940 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 A0A0G2JN53 185 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 A0A1B0GUV1 79 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 PPP5D1E7EU14 171 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 GPR31O00270 319 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 UPK2O00526 184 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 LMX1BO60663 402 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 MED6O75586 246 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 YIF1AO95070 293 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 ATP5G1P05496 136 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 CRYGDP07320 174 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 CD79AP11912 226 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 FOLR2P14207 255 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 IDO1P14902 403 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 ZNF30P17039 623 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 HIST1H1TP22492 207 aaPredicted RBP3.01□□□□□ -1.93
SKP1-209ENST00000522552 POLR2IP36954 125 aaKnown RBP3.01□□□□□ -1.93
SKP1-209ENST00000522552 TALDO1P37837 337 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 SLC25A1P53007 311 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 SNAP25P60880 206 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 UBE2NP61088 152 aaKnown RBP3.01□□□□□ -1.93
SKP1-209ENST00000522552 RUNX1Q01196 453 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 CCDC153Q494R4 210 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 ZNF774Q6NX45 483 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 FBXL22Q6P050 247 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 ARL9Q6T311 187 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 ALKAL1Q6UXT8 129 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 H2AFVQ71UI9 128 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 MOB1BQ7L9L4 216 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 HSD17B13Q7Z5P4 300 aaPredicted RBP3.01□□□□□ -1.93
SKP1-209ENST00000522552 DHFR2Q86XF0 187 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 TGIF2LYQ8IUE0 185 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 SLC35G3Q8N808 338 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 ZNF614Q8N883 585 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 OR13D1Q8NGV5 346 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 OR10A6Q8NH74 314 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 FXYD5Q96DB9 178 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 DCUN1D1Q96GG9 259 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 VSIG2Q96IQ7 327 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 KCNS1Q96KK3 526 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 LINC00477Q96M19 166 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 SLC25A2Q9BXI2 301 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 PTGES2Q9H7Z7 377 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 BIN3Q9NQY0 253 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 GLS2Q9UI32 602 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 PKIGQ9Y2B9 76 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 SLC35A3Q9Y2D2 325 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 UTP11Q9Y3A2 253 aaKnown RBP3.01□□□□□ -1.93
SKP1-209ENST00000522552 ENPP4Q9Y6X5 453 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 TMEM56-RWDD3S4R434 201 aa3.01□□□□□ -1.93
SKP1-209ENST00000522552 NUP160Q12769 1436 aa3□□□□□ -1.93
SKP1-209ENST00000522552 CHD4Q14839 1912 aa3□□□□□ -1.93
SKP1-209ENST00000522552 MIA3Q5JRA6 1907 aa3□□□□□ -1.93
SKP1-209ENST00000522552 KIF24Q5T7B8 1368 aa3□□□□□ -1.93
SKP1-209ENST00000522552 RAI1Q7Z5J4 1906 aaPredicted RBP3□□□□□ -1.93
SKP1-209ENST00000522552 TRAV8-3A0A0A6YYJ7 113 aa3□□□□□ -1.93
SKP1-209ENST00000522552 IGHV6-1A0A0B4J1U7 121 aa3□□□□□ -1.93
SKP1-209ENST00000522552 EXOC1LA0A1B0GW35 172 aa3□□□□□ -1.93
SKP1-209ENST00000522552 PGPA6NDG6 321 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms