RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 DNAJC9Q8WXX5 260 aa12.06□□□□□ -0.48
TRAPPC9-213ENST00000522504 TFAP2CQ92754 450 aa12.06□□□□□ -0.48
TRAPPC9-213ENST00000522504 DPF1Q92782 380 aa12.06□□□□□ -0.48
TRAPPC9-213ENST00000522504 UTP4Q969X6 686 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-213ENST00000522504 NRBF2Q96F24 287 aa12.06□□□□□ -0.48
TRAPPC9-213ENST00000522504 GPR61Q9BZJ8 451 aa12.06□□□□□ -0.48
TRAPPC9-213ENST00000522504 PPIL3Q9H2H8 161 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-213ENST00000522504 EXOSC4Q9NPD3 245 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-213ENST00000522504 MOB4Q9Y3A3 225 aa12.06□□□□□ -0.48
TRAPPC9-213ENST00000522504 PCDHGB5Q9Y5G0 923 aa12.06□□□□□ -0.48
TRAPPC9-213ENST00000522504 HSPE1-MOB4S4R3N1 261 aa12.06□□□□□ -0.48
TRAPPC9-213ENST00000522504 TCRBV3S1A0A5B6 114 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 M0QZK8 103 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 TOR1AO14656 332 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 SH2D1BO14796 132 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 IGHV3-7P01780 117 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 ATF1P18846 271 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 LMO1P25800 156 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 CEACAM3P40198 252 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 PTGFRP43088 359 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 ARHGDIBP52566 201 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 ISL1P61371 349 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 KPNB1Q14974 876 aaKnown RBP12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 ZSCAN26Q16670 478 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 Q6P435 159 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 C5orf56Q8N8D9 126 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 OR51D1Q8NGF3 324 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 OR56B4Q8NH76 319 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 PP6455Q8WZ26 134 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 LEAP2Q969E1 77 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 SPACA5Q96QH8 159 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 ADI1Q9BV57 179 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 DNAH1Q9P2D7 4330 aa12.05□□□□□ -0.48
TRAPPC9-213ENST00000522504 A0A1W2PPI3 338 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 LINC01548A6NM66 108 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 SLC33A1O00400 549 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 GYG2O15488 501 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 SULT1C4O75897 302 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 KDM4BO94953 1096 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 OR2T7P0C7T2 308 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 FAM106CPP0CH98 169 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 CGB3P0DN86 165 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 CGB7P0DN87 165 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 NFYBP25208 207 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 MYCNOSP40205 109 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 RASSF2P50749 326 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 PRRX1P54821 245 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 DGCR2P98153 550 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 SCN1BQ07699 218 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 HNF4GQ14541 408 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 KRBOX4Q5JUW0 171 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 THNSL2Q86YJ6 484 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 GID4Q8IVV7 300 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 DRAM1Q8N682 238 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 KLHL30-AS1Q8NEE0 82 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 CCDC54Q8NEL0 328 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 OR10H4Q8NGA5 316 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 OR4D6Q8NGJ1 314 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 OR5D18Q8NGL1 313 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 CREB3L1Q96BA8 519 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 FGGYQ96C11 551 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 SLC7A6OSQ96CW6 309 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 C10orf35Q96D05 121 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 RAX2Q96IS3 184 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 KIRREL1Q96J84 757 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 MCRIP2Q9BUT9 160 aaKnown RBP12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 COMMD4Q9H0A8 199 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 WARS2Q9UGM6 360 aaKnown RBP12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 GLS2Q9UI32 602 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 LSM4Q9Y4Z0 139 aaKnown RBP12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 U3KQK5 164 aa12.04□□□□□ -0.48
TRAPPC9-213ENST00000522504 ERICH4A6NGS2 130 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 NUDT19A8MXV4 375 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 OOSP1A8MZH6 123 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 RRP9O43818 475 aaKnown RBP12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 CYB5AP00167 134 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 CSN2P05814 226 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 HOXB6P17509 224 aaKnown RBP12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 HTR1FP30939 366 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 POLR2IP36954 125 aaKnown RBP12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 MNDAP41218 407 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 LUMP51884 338 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 ZNF85Q03923 595 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 FLOT2Q14254 428 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 ATXN7L3Q14CW9 347 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 DNAL1Q4LDG9 190 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 TP53I3Q53FA7 332 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 CCDC144NLQ6NUI1 221 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 UTS2BQ765I0 119 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 OR10AC1Q8NH08 325 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 PRR25Q96S07 402 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 PRRG3Q9BZD7 231 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 KRT84Q9NSB2 600 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 GNG8Q9UK08 70 aa12.03□□□□□ -0.48
TRAPPC9-213ENST00000522504 KBTBD11-OT1A0A1B0GTJ5 212 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 SERPINE3A8MV23 424 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 NHLRC4P0CG21 123 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 UBCP0CG48 685 aaKnown RBP12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 ZNF44P15621 663 aa12.02□□□□□ -0.49
TRAPPC9-213ENST00000522504 PRKACBP22694 351 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms