RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 PAQR4Q8N4S7 273 aaPredicted RBP6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 JAGN1Q8N5M9 183 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 ZNF283Q8N7M2 679 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 BEST4Q8NFU0 473 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 OR11H7Q8NGC8 314 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 OR52N4Q8NGI2 321 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 OR6M1Q8NGM8 313 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 C15orf40Q8WUR7 153 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 GIMAP1Q8WWP7 306 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 ASCL2Q99929 193 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 GAL3ST1Q99999 423 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 NIPAL2Q9H841 368 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 CNTD2Q9H8S5 307 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 SLC7A10Q9NS82 523 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 ING3Q9NXR8 418 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 NKIRAS2Q9NYR9 191 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 COPZ2Q9P299 210 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 CKLFQ9UBR5 152 aa6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 ELF5Q9UKW6 265 aaPredicted RBP6.03□□□□□ -1.44
CTNNA1-227ENST00000521387 GJE1A6NN92 205 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 ZNF716A6NP11 495 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 RGS13O14921 159 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 ARPC1BO15143 372 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 AKR7A2O43488 359 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 DNPH1O43598 174 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 SYNGR3O43761 229 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 IGLV1-44P01699 117 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 FCER2P06734 321 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 CELA3BP08861 270 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 SULT1A3P0DMM9 295 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 SULT1A4P0DMN0 295 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 VSIG10L2P0DP72 767 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 CCL1P22362 96 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 STOMP27105 288 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 PRSS3P35030 304 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 GNALP38405 381 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 RAD52P43351 418 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 GRB2P62993 217 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 MRPS15P82914 257 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 QRFPP83859 136 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 PCGF3Q3KNV8 242 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 MOGAT2Q3SYC2 334 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 CD276Q5ZPR3 534 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 Q6ZTK2 550 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 LRP11Q86VZ4 500 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 LRRC18Q8N456 261 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 C1orf162Q8NEQ5 155 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 OR4C16Q8NGL9 310 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 OR14K1Q8NGZ2 314 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 OR56B4Q8NH76 319 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 GPX8Q8TED1 209 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 DDB2Q92466 427 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 FOXRED1Q96CU9 486 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 SEH1LQ96EE3 360 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 FAM71F1Q96KD3 344 aaPredicted RBP6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 LYZL4Q96KX0 146 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 SEC22CQ9BRL7 303 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 TMEM246Q9BRR3 403 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 SF3B5Q9BWJ5 86 aaKnown RBP6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 C20orf85Q9H1P6 137 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 GPR84Q9NQS5 396 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 RAB22AQ9UL26 194 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 SIGLEC9Q9Y336 463 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 FLVCR1Q9Y5Y0 555 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 POMT1Q9Y6A1 747 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 VPS13DQ5THJ4 4388 aa6.02□□□□□ -1.45
CTNNA1-227ENST00000521387 IGKV3D-15A0A087WSY6 115 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 TRAV40A0A0B4J280 105 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 FAM172BPA6NC97 362 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 M0R233 179 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 SULT1C2O00338 296 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 FABP7O15540 132 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 ICMTO60725 284 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 PEX14O75381 377 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 FOXH1O75593 365 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 NDUFB6O95139 128 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 IGLV3-1P01715 115 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 IGHV4-59P01825 116 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 IL5P05113 134 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 GSTT2P0CG29 244 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 NAT2P11245 290 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 NR2C1P13056 603 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 GTF2F2P13984 249 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 ZNF20P17024 532 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 CXCL3P19876 107 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 RAB3AP20336 220 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 RAB6AP20340 208 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 ERP29P30040 261 aaKnown RBP6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 HOXD3P31249 432 aaPredicted RBP6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 VEGFCP49767 419 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 ZNF84P51523 738 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 SEC61A1P61619 476 aaKnown RBP6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 GALK2Q01415 458 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 PAX2Q02962 417 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 UNC119Q13432 240 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 ZNF260Q3ZCT1 412 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 LAMTOR1Q6IAA8 161 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 ZNF627Q7L945 461 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 AAED1Q7RTV5 226 aa6.01□□□□□ -1.45
CTNNA1-227ENST00000521387 SLC36A1Q7Z2H8 476 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms