RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 ARHGEF11O15085 1522 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 C9orf84Q5VXU9 1444 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 ARHGEF10O15013 1369 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 A0A087WXM4 84 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 A0A0X1KG70 313 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 A0A1B0GV72 72 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 C5orf63A6NC05 138 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 OR2AG2A6NM03 316 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 H3BSA7 217 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 K7EP13 123 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 BPY2O14599 106 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 GGCTO75223 188 aaKnown RBP2.79□□□□□ -1.96
SKP1-208ENST00000521216 UGT2B11O75310 529 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 CLDN11O75508 207 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 POP7O75817 140 aaKnown RBP2.79□□□□□ -1.96
SKP1-208ENST00000521216 ZMPSTE24O75844 475 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 NBEAP1P0C6P0 100 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 OR8U9P0C7N5 309 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 METTL15P1P0C7V9 234 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 NQO2P16083 231 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 ME2P23368 584 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 MAGEA3P43357 314 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 CXCL12P48061 93 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 SERPINB10P48595 397 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 RAB25P57735 213 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 CDC42P60953 191 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 ZNF266Q14584 549 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 EXOC3L4Q17RC7 722 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 C5orf64Q2M2E5 130 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 HIKESHIQ53FT3 197 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 MPV17L2Q567V2 206 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 ACSBG2Q5FVE4 666 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 SPANXN2Q5MJ10 180 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 C9orf64Q5T6V5 341 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 SPNS3Q6ZMD2 512 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 SLC35D2Q76EJ3 337 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 C10orf107Q8IVU9 208 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 KATNAL2Q8IYT4 538 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 OFCC1Q8IZS5 231 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 TCTE3Q8IZS6 198 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 OSR2Q8N2R0 312 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 SLC35F6Q8N357 371 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 C12orf45Q8N5I9 185 aaPredicted RBP2.79□□□□□ -1.96
SKP1-208ENST00000521216 GDPD1Q8N9F7 314 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 CHST4Q8NCG5 386 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 LYPD6BQ8NI32 183 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 ACTL9Q8TC94 416 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 NEK7Q8TDX7 302 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 C1orf54Q8WWF1 131 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 RAB1CQ92928 201 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 KIAA1143Q96AT1 154 aaPredicted RBP2.79□□□□□ -1.96
SKP1-208ENST00000521216 PPWD1Q96BP3 646 aaKnown RBP2.79□□□□□ -1.96
SKP1-208ENST00000521216 C12orf43Q96C57 262 aaKnown RBP2.79□□□□□ -1.96
SKP1-208ENST00000521216 SMIM12Q96EX1 92 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 PRRC1Q96M27 445 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 PACRGQ96M98 296 aaPredicted RBP2.79□□□□□ -1.96
SKP1-208ENST00000521216 GLT1D1Q96MS3 346 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 HBEGFQ99075 208 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 CHP1Q99653 195 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 NIPSNAP1Q9BPW8 284 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 AIF1LQ9BQI0 150 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 TIMM29Q9BSF4 260 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 GGACTQ9BVM4 153 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 ULBP2Q9BZM5 246 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 UCK2Q9BZX2 261 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 NXF2Q9GZY0 626 aaKnown RBP2.79□□□□□ -1.96
SKP1-208ENST00000521216 NMNAT1Q9HAN9 279 aaPredicted RBP2.79□□□□□ -1.96
SKP1-208ENST00000521216 BEX1Q9HBH7 125 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 RETNQ9HD89 108 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 DYRK4Q9NR20 520 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 FBXO8Q9NRD0 319 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 LYARQ9NX58 379 aaKnown RBP2.79□□□□□ -1.96
SKP1-208ENST00000521216 IFNKQ9P0W0 207 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 MYEF2Q9P2K5 600 aaKnown RBP2.79□□□□□ -1.96
SKP1-208ENST00000521216 SMPXQ9UHP9 88 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 C3orf18Q9UK00 162 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.79□□□□□ -1.96
SKP1-208ENST00000521216 MMACHCQ9Y4U1 282 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 A0A1B0GUL6 1792 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 CEP170BQ9Y4F5 1589 aaPredicted RBP2.78□□□□□ -1.96
SKP1-208ENST00000521216 LAMC3Q9Y6N6 1575 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 LRRC9Q6ZRR7 1453 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 ABCC5O15440 1437 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 TMEM2Q9UHN6 1383 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 CHD2O14647 1828 aaKnown RBP2.78□□□□□ -1.96
SKP1-208ENST00000521216 IGHV1OR15-9A0A0B4J2B8 117 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 TRBV11-1A0A0K0K1C0 115 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 TSTD3H0UI37 97 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 H7C417 338 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 BHLHE40O14503 412 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 COPEO14579 308 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 EIF4E2O60573 245 aaKnown RBP2.78□□□□□ -1.96
SKP1-208ENST00000521216 IFNA7P01567 189 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 SERPINE2P07093 398 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 ZNF688P0C7X2 276 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 MYL2P10916 166 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 CD37P11049 281 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 GTF2E2P29084 291 aaKnown RBP2.78□□□□□ -1.96
SKP1-208ENST00000521216 RFC3P40938 356 aa2.78□□□□□ -1.96
SKP1-208ENST00000521216 P2RY2P41231 377 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms