RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 FAM107AO95990 144 aa12.93□□□□□ -0.34
TRAM1-204ENST00000521049 IGHG2P01859 326 aa12.93□□□□□ -0.34
TRAM1-204ENST00000521049 CSN2P05814 226 aa12.93□□□□□ -0.34
TRAM1-204ENST00000521049 MTCP1P56278 107 aa12.93□□□□□ -0.34
TRAM1-204ENST00000521049 RBM39Q14498 530 aaKnown RBP12.93□□□□□ -0.34
TRAM1-204ENST00000521049 PTGES3Q15185 160 aaKnown RBP12.93□□□□□ -0.34
TRAM1-204ENST00000521049 CASC10Q5T4H9 136 aa12.93□□□□□ -0.34
TRAM1-204ENST00000521049 C9orf66Q5T8R8 295 aa12.93□□□□□ -0.34
TRAM1-204ENST00000521049 NXNL2Q5VZ03 156 aa12.93□□□□□ -0.34
TRAM1-204ENST00000521049 TEX38Q6PEX7 206 aa12.93□□□□□ -0.34
TRAM1-204ENST00000521049 BCDIN3DQ7Z5W3 292 aaKnown RBP12.93□□□□□ -0.34
TRAM1-204ENST00000521049 PRR25Q96S07 402 aa12.93□□□□□ -0.34
TRAM1-204ENST00000521049 PRRG3Q9BZD7 231 aa12.93□□□□□ -0.34
TRAM1-204ENST00000521049 DCLRE1BQ9H816 532 aa12.93□□□□□ -0.34
TRAM1-204ENST00000521049 GSTK1Q9Y2Q3 226 aa12.93□□□□□ -0.34
TRAM1-204ENST00000521049 IGKV1-9A0A0C4DH69 117 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 H3BSH0 61 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 PRKACBP22694 351 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 CHATP28329 748 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 POU3F4P49335 361 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 SNU13P55769 128 aaKnown RBP12.92□□□□□ -0.34
TRAM1-204ENST00000521049 PDZK1IP1Q13113 114 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 KIR2DS1Q14954 304 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 C17orf58Q2M2W7 97 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 UTF1Q5T230 341 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 SLC35E3Q7Z769 313 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 FOXRED2Q8IWF2 684 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 STPG2Q8N412 459 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 OR5M8Q8NGP6 311 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 OR56B4Q8NH76 319 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 MUC7Q8TAX7 377 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 TOMM40LQ969M1 308 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 NSL1Q96IY1 281 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 DUX3Q96PT4 197 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 ASCL2Q99929 193 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 COMMD4Q9H0A8 199 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 LINC00527Q9UJ94 153 aa12.92□□□□□ -0.34
TRAM1-204ENST00000521049 AMMECR1Q9Y4X0 333 aaPredicted RBP12.92□□□□□ -0.34
TRAM1-204ENST00000521049 KBTBD11-OT1A0A1B0GTJ5 212 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 METTL15A6NJ78 407 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 AQP12BA6NM10 295 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 J3QR06 171 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 SULT1C4O75897 302 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 CGB3P0DN86 165 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 CGB7P0DN87 165 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 TMEM11P17152 192 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 ATF1P18846 271 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 ECI1P42126 302 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 LUMP51884 338 aaPredicted RBP12.91□□□□□ -0.34
TRAM1-204ENST00000521049 RAB25P57735 213 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 HES1Q14469 280 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 PNLIPRP3Q17RR3 467 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 KRBOX4Q5JUW0 171 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 LHFPL2Q6ZUX7 228 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 UTS2BQ765I0 119 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 SSX6Q7RTT6 188 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 AQP12AQ8IXF9 295 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 DRAM1Q8N682 238 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 CHST4Q8NCG5 386 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 OR8U1Q8NH10 309 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 NRBF2Q96F24 287 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 KIRREL1Q96J84 757 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 HRASLS5Q96KN8 279 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 RHOFQ9HBH0 211 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 OR6C3Q9NZP0 311 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 SCOCQ9UIL1 159 aa12.91□□□□□ -0.34
TRAM1-204ENST00000521049 DYNC2H1Q8NCM8 4307 aaKnown RBP12.91□□□□□ -0.34
TRAM1-204ENST00000521049 A0A1W2PPI3 338 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 KDM4BO94953 1096 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 OR2T7P0C7T2 308 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 NFYBP25208 207 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 CDX1P47902 265 aaPredicted RBP12.9□□□□□ -0.34
TRAM1-204ENST00000521049 RAB7AP51149 207 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 HNF4GQ14541 408 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 Q6P435 159 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 OR8H3Q8N146 312 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 TCEANCQ8N8B7 351 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 ZNF565Q8N9K5 539 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 CCDC197Q8NCU1 140 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 TMEM163Q8TC26 289 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 COQ2Q96H96 371 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 GON7Q9BXV9 100 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 NCOR1P1Q9H4R4 102 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 KRT84Q9NSB2 600 aa12.9□□□□□ -0.34
TRAM1-204ENST00000521049 IGKV1-12A0A0C4DH73 117 aa12.89□□□□□ -0.35
TRAM1-204ENST00000521049 A0A1W2PQL4 384 aaPredicted RBP12.89□□□□□ -0.35
TRAM1-204ENST00000521049 LINC01548A6NM66 108 aa12.89□□□□□ -0.35
TRAM1-204ENST00000521049 AP4M1O00189 453 aa12.89□□□□□ -0.35
TRAM1-204ENST00000521049 IGKV1D-12P01611 117 aa12.89□□□□□ -0.35
TRAM1-204ENST00000521049 UBCP0CG48 685 aaKnown RBP12.89□□□□□ -0.35
TRAM1-204ENST00000521049 ZNF44P15621 663 aa12.89□□□□□ -0.35
TRAM1-204ENST00000521049 DAPP51397 102 aa12.89□□□□□ -0.35
TRAM1-204ENST00000521049 SCN1BQ07699 218 aa12.89□□□□□ -0.35
TRAM1-204ENST00000521049 MADCAM1Q13477 382 aa12.89□□□□□ -0.35
TRAM1-204ENST00000521049 EBI3Q14213 229 aa12.89□□□□□ -0.35
TRAM1-204ENST00000521049 DMRTA1Q5VZB9 504 aa12.89□□□□□ -0.35
TRAM1-204ENST00000521049 FAHD1Q6P587 224 aa12.89□□□□□ -0.35
TRAM1-204ENST00000521049 LCNL1Q6ZST4 164 aa12.89□□□□□ -0.35
TRAM1-204ENST00000521049 GID4Q8IVV7 300 aa12.89□□□□□ -0.35
TRAM1-204ENST00000521049 RDH10Q8IZV5 341 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms