RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 TBX5Q99593 518 aa9.09□□□□□ -0.95
MRPS28-206ENST00000520946 CHST5Q9GZS9 411 aa9.09□□□□□ -0.95
MRPS28-206ENST00000520946 SLC25A19Q9HC21 320 aa9.09□□□□□ -0.95
MRPS28-206ENST00000520946 MED4Q9NPJ6 270 aa9.09□□□□□ -0.95
MRPS28-206ENST00000520946 CLN6Q9NWW5 311 aa9.09□□□□□ -0.95
MRPS28-206ENST00000520946 ZNF256Q9Y2P7 627 aaPredicted RBP9.09□□□□□ -0.95
MRPS28-206ENST00000520946 LSM4Q9Y4Z0 139 aaKnown RBP9.09□□□□□ -0.95
MRPS28-206ENST00000520946 SMAD5-AS1Q9Y6J3 95 aa9.09□□□□□ -0.95
MRPS28-206ENST00000520946 KMT2CQ8NEZ4 4911 aaKnown RBP9.08□□□□□ -0.96
MRPS28-206ENST00000520946 DSCAML1Q8TD84 2053 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 ZNF729A6NN14 1252 aaPredicted RBP9.08□□□□□ -0.96
MRPS28-206ENST00000520946 AP4M1O00189 453 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 DEGS1O15121 323 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 FGF16O43320 207 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 RRP9O43818 475 aaKnown RBP9.08□□□□□ -0.96
MRPS28-206ENST00000520946 SRSF10O75494 262 aaKnown RBP9.08□□□□□ -0.96
MRPS28-206ENST00000520946 IGKV1D-33P01593 117 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 IGKV1-33P01594 117 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 IGHV3-7P01780 117 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 CD34P28906 385 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 C21orf33P30042 268 aaPredicted RBP9.08□□□□□ -0.96
MRPS28-206ENST00000520946 GLP1RP43220 463 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 RAB7AP51149 207 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 CRISP1P54107 249 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 LTC4SQ16873 150 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 LHFPL2Q6ZUX7 228 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 FAM220AQ7Z4H9 259 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 MOB3BQ86TA1 216 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 STPG2Q8N412 459 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 C5orf56Q8N8D9 126 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 DNAAF1Q8NEP3 725 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 OR10X1Q8NGY0 326 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 HAVCR2Q8TDQ0 301 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 C10orf35Q96D05 121 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 DCLRE1BQ9H816 532 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 ZMAT4Q9H898 229 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 HMG20AQ9NP66 347 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 MRM2Q9UI43 246 aaKnown RBP9.08□□□□□ -0.96
MRPS28-206ENST00000520946 ARL2BPQ9Y2Y0 163 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 KIAA2026Q5HYC2 2103 aa9.08□□□□□ -0.96
MRPS28-206ENST00000520946 METTL15A6NJ78 407 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 LY6LH3BQJ8 138 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 PRKYO43930 277 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 RPLP1P05386 114 aaKnown RBP9.07□□□□□ -0.96
MRPS28-206ENST00000520946 HOXB6P17509 224 aaKnown RBP9.07□□□□□ -0.96
MRPS28-206ENST00000520946 CCL1P22362 96 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 CHATP28329 748 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 GDNFP39905 211 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 GNG10P50151 68 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 MS4A2Q01362 244 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 PDZK1IP1Q13113 114 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 GPR50Q13585 617 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 ATXN7L3Q14CW9 347 aaPredicted RBP9.07□□□□□ -0.96
MRPS28-206ENST00000520946 DEFB136Q30KP8 78 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 FAM27D1Q5T7N8 215 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 TMEM179BQ7Z7N9 219 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 HS3ST5Q8IZT8 346 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 CHST4Q8NCG5 386 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 DNAJC9Q8WXX5 260 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 RFT1Q96AA3 541 aa9.07□□□□□ -0.96
MRPS28-206ENST00000520946 MEIKINA0A087WXM9 373 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 KBTBD11-OT1A0A1B0GTJ5 212 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 J3QR06 171 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 HSPB6O14558 160 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 MPZL2O60487 215 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 UBCP0CG48 685 aaKnown RBP9.06□□□□□ -0.96
MRPS28-206ENST00000520946 ATF1P18846 271 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 VDAC1P21796 283 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 KIR2DS1Q14954 304 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 PTGES3Q15185 160 aaKnown RBP9.06□□□□□ -0.96
MRPS28-206ENST00000520946 NKAPLQ5M9Q1 402 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 NXNL2Q5VZ03 156 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 Q6ZSR3 168 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 BCDIN3DQ7Z5W3 292 aaKnown RBP9.06□□□□□ -0.96
MRPS28-206ENST00000520946 CATSPERDQ86XM0 798 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 GID4Q8IVV7 300 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 OR8H3Q8N146 312 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 TCEANCQ8N8B7 351 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 OR10H4Q8NGA5 316 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 CANT1Q8WVQ1 401 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 ASB9Q96DX5 294 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 NSL1Q96IY1 281 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 OPALINQ96PE5 141 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 RCHY1Q96PM5 261 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 RASL11BQ9BPW5 248 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 BARHL1Q9BZE3 327 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 ADGRL4Q9HBW9 690 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 GNG8Q9UK08 70 aa9.06□□□□□ -0.96
MRPS28-206ENST00000520946 A0A087X0M5 115 aa9.05□□□□□ -0.96
MRPS28-206ENST00000520946 LOC107986453A0A1B0GWG9 222 aa9.05□□□□□ -0.96
MRPS28-206ENST00000520946 A0A1B0GX30 115 aa9.05□□□□□ -0.96
MRPS28-206ENST00000520946 FAM90A18PA6NE21 464 aa9.05□□□□□ -0.96
MRPS28-206ENST00000520946 FAM90A16PA6NEW6 464 aa9.05□□□□□ -0.96
MRPS28-206ENST00000520946 FAM90A20PA6NIJ5 464 aa9.05□□□□□ -0.96
MRPS28-206ENST00000520946 FAM90A9PA6NNJ1 464 aa9.05□□□□□ -0.96
MRPS28-206ENST00000520946 FAM90A12PA8MX19 464 aa9.05□□□□□ -0.96
MRPS28-206ENST00000520946 FAM90A5PA8MXJ8 464 aa9.05□□□□□ -0.96
MRPS28-206ENST00000520946 IGHG2P01859 326 aa9.05□□□□□ -0.96
MRPS28-206ENST00000520946 GAPDHP04406 335 aaKnown RBP9.05□□□□□ -0.96
MRPS28-206ENST00000520946 ELANEP08246 267 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms