RNA–Protein interactions for RNA: ENST00000520895.5

HDAC2-209, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-209ENST00000520895 RBM11P57052 281 aaKnown RBP12.69□□□□□ -0.38
HDAC2-209ENST00000520895 BPIFB3P59826 476 aa12.69□□□□□ -0.38
HDAC2-209ENST00000520895 NEDD8Q15843 81 aa12.69□□□□□ -0.38
HDAC2-209ENST00000520895 PAN3Q58A45 887 aaKnown RBP12.69□□□□□ -0.38
HDAC2-209ENST00000520895 BRD3OSQ6XYD6 125 aa12.69□□□□□ -0.38
HDAC2-209ENST00000520895 C1orf122Q6ZSJ8 110 aa12.69□□□□□ -0.38
HDAC2-209ENST00000520895 LINC00596Q86U02 117 aa12.69□□□□□ -0.38
HDAC2-209ENST00000520895 LYPD6Q86Y78 171 aa12.69□□□□□ -0.38
HDAC2-209ENST00000520895 PDZD9Q8IXQ8 264 aa12.69□□□□□ -0.38
HDAC2-209ENST00000520895 Q8N7P7 452 aa12.69□□□□□ -0.38
HDAC2-209ENST00000520895 TSPAN14Q8NG11 270 aa12.69□□□□□ -0.38
HDAC2-209ENST00000520895 MRPS24Q96EL2 167 aaKnown RBP12.69□□□□□ -0.38
HDAC2-209ENST00000520895 SUCNR1Q9BXA5 334 aa12.69□□□□□ -0.38
HDAC2-209ENST00000520895 VCX3AQ9NNX9 186 aa12.69□□□□□ -0.38
HDAC2-209ENST00000520895 GHRLQ9UBU3 117 aa12.69□□□□□ -0.38
HDAC2-209ENST00000520895 A0A087WXM4 84 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 IGHV1-69DA0A0B4J2H0 117 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 TRDV1A0A1B0GX56 115 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 MEX3AA1L020 520 aaKnown RBP12.68□□□□□ -0.38
HDAC2-209ENST00000520895 GEMIN2O14893 280 aaKnown RBP12.68□□□□□ -0.38
HDAC2-209ENST00000520895 CRTAPO75718 401 aaPredicted RBP12.68□□□□□ -0.38
HDAC2-209ENST00000520895 IGHV1-69P01742 117 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 UBBP0CG47 229 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 CCL3L1P16619 93 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 MYL9P24844 172 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 P2RX3P56373 397 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 AESQ08117 197 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 ZNF273Q14593 569 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 NHLRC3Q5JS37 347 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 NCR3LG1Q68D85 454 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 TRAPPC6BQ86SZ2 158 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 BCL6BQ8N143 479 aaPredicted RBP12.68□□□□□ -0.38
HDAC2-209ENST00000520895 TPRX1Q8N7U7 411 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 CST11Q9H112 138 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 PLGRKTQ9HBL7 147 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 ING3Q9NXR8 418 aa12.68□□□□□ -0.38
HDAC2-209ENST00000520895 AK6Q9Y3D8 172 aaKnown RBP12.68□□□□□ -0.38
HDAC2-209ENST00000520895 TRAV24A0A0B4J272 114 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 PDCD5O14737 125 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 CSN2P05814 226 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 MGMTP16455 207 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 GALP22466 123 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 PRTN3P24158 256 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 HTR2CP28335 458 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 ERP29P30040 261 aaKnown RBP12.67□□□□□ -0.38
HDAC2-209ENST00000520895 PSMD7P51665 324 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 GUCA2AQ02747 115 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 PRB3Q04118 309 aaPredicted RBP12.67□□□□□ -0.38
HDAC2-209ENST00000520895 ATXN7L3Q14CW9 347 aaPredicted RBP12.67□□□□□ -0.38
HDAC2-209ENST00000520895 TAF9Q16594 264 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 MPV17LQ2QL34 196 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 KRBOX4Q5JUW0 171 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 C1orf100Q5SVJ3 147 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 ATAD3CQ5T2N8 411 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 SYT6Q5T7P8 510 aaPredicted RBP12.67□□□□□ -0.38
HDAC2-209ENST00000520895 RUSC1-AS1Q66K80 236 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 CD200R1LQ6Q8B3 271 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 C9orf139Q6ZV77 190 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 OR6M1Q8NGM8 313 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 ZNF714Q96N38 554 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 JMJD8Q96S16 334 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 BARHL1Q9BZE3 327 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 SELENOIQ9C0D9 397 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 BANF2Q9H503 90 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 STUB1Q9UNE7 303 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 ATRQ13535 2644 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 DNHD1Q96M86 4753 aa12.67□□□□□ -0.38
HDAC2-209ENST00000520895 TRGV10A0A0A0MS01 117 aa12.66□□□□□ -0.38
HDAC2-209ENST00000520895 A0A0A6YYJ9 748 aa12.66□□□□□ -0.38
HDAC2-209ENST00000520895 RNASEK-C17orf49H0YIS7 233 aa12.66□□□□□ -0.38
HDAC2-209ENST00000520895 ZNF728P0DKX0 622 aa12.66□□□□□ -0.38
HDAC2-209ENST00000520895 DLX1P56177 255 aa12.66□□□□□ -0.38
HDAC2-209ENST00000520895 ERVFRD-1P60508 538 aa12.66□□□□□ -0.38
HDAC2-209ENST00000520895 C22orf42Q6IC83 251 aa12.66□□□□□ -0.38
HDAC2-209ENST00000520895 METAP1DQ6UB28 335 aaPredicted RBP12.66□□□□□ -0.38
HDAC2-209ENST00000520895 SUMF2Q8NBJ7 301 aa12.66□□□□□ -0.38
HDAC2-209ENST00000520895 FAM46BQ96A09 425 aa12.66□□□□□ -0.38
HDAC2-209ENST00000520895 C1orf147Q96MC9 270 aaPredicted RBP12.66□□□□□ -0.38
HDAC2-209ENST00000520895 DPCDQ9BVM2 203 aaPredicted RBP12.66□□□□□ -0.38
HDAC2-209ENST00000520895 IFT22Q9H7X7 185 aa12.66□□□□□ -0.38
HDAC2-209ENST00000520895 UNKLQ9H9P5 680 aaKnown RBP12.66□□□□□ -0.38
HDAC2-209ENST00000520895 SPACA1Q9HBV2 294 aa12.66□□□□□ -0.38
HDAC2-209ENST00000520895 SSR3Q9UNL2 185 aa12.66□□□□□ -0.38
HDAC2-209ENST00000520895 UBE2J1Q9Y385 318 aaPredicted RBP12.66□□□□□ -0.38
HDAC2-209ENST00000520895 LINC00312Q9Y6C7 94 aa12.66□□□□□ -0.38
HDAC2-209ENST00000520895 V9GY05 133 aa12.66□□□□□ -0.38
HDAC2-209ENST00000520895 TRAV1-2A0A0B4J238 106 aa12.65□□□□□ -0.38
HDAC2-209ENST00000520895 ODAMA1E959 279 aa12.65□□□□□ -0.38
HDAC2-209ENST00000520895 SLC22A1O15245 554 aa12.65□□□□□ -0.38
HDAC2-209ENST00000520895 RANBP1P43487 201 aa12.65□□□□□ -0.38
HDAC2-209ENST00000520895 GLIPR1P48060 266 aa12.65□□□□□ -0.38
HDAC2-209ENST00000520895 KCNJ3P48549 501 aa12.65□□□□□ -0.38
HDAC2-209ENST00000520895 KLRD1Q13241 179 aa12.65□□□□□ -0.38
HDAC2-209ENST00000520895 USP43Q70EL4 1123 aa12.65□□□□□ -0.38
HDAC2-209ENST00000520895 SIGLECL1Q8N7X8 197 aa12.65□□□□□ -0.38
HDAC2-209ENST00000520895 TMEM104Q8NE00 496 aa12.65□□□□□ -0.38
HDAC2-209ENST00000520895 NEK7Q8TDX7 302 aa12.65□□□□□ -0.38
HDAC2-209ENST00000520895 TNFRSF14Q92956 283 aa12.65□□□□□ -0.38
HDAC2-209ENST00000520895 ZDHHC16Q969W1 377 aa12.65□□□□□ -0.38
HDAC2-209ENST00000520895 COQ2Q96H96 371 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms