RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 TIMM10BQ9Y5J6 103 aa2.34□□□□□ -2.03
HDAC2-208ENST00000520746 USF3Q68DE3 2245 aa2.34□□□□□ -2.04
HDAC2-208ENST00000520746 DNHD1Q96M86 4753 aa2.34□□□□□ -2.04
HDAC2-208ENST00000520746 DSCAMO60469 2012 aa2.34□□□□□ -2.04
HDAC2-208ENST00000520746 NINQ8N4C6 2090 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 HEATR5BQ9P2D3 2071 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 TRBV6-6A0A0A6YYG2 114 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 TCRBV9S1A1TA0A576 114 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 E9PBE3 544 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 hCG_2039718K7EN88 272 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 UPK1AO00322 258 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 ARPC3O15145 178 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 KCNK2O95069 426 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 IGKV1D-16P01601 117 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 RCC1P18754 421 aaPredicted RBP2.33□□□□□ -2.04
HDAC2-208ENST00000520746 NPR2P20594 1047 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 CASQ1P31415 396 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 PHBP35232 272 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 RPL13AP40429 203 aaKnown RBP2.33□□□□□ -2.04
HDAC2-208ENST00000520746 SERPINB8P50452 374 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 P2RX1P51575 399 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 GPM6AP51674 278 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 BAMBIQ13145 260 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 QPRTQ15274 297 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 TOMM34Q15785 309 aaPredicted RBP2.33□□□□□ -2.04
HDAC2-208ENST00000520746 GABRA6Q16445 453 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 MICBQ29980 383 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 NDUFAF6Q330K2 333 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 HIKESHIQ53FT3 197 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 CFAP157Q5JU67 520 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 OR2G6Q5TZ20 316 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 ANKRD26P1Q6NSI1 321 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 NOXRED1Q6NXP6 359 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 Q6P435 159 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 Q6ZN92 141 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 ACP7Q6ZNF0 438 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 TMPPEQ6ZT21 453 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 AAED1Q7RTV5 226 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 ZNF786Q8N393 782 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 CDRT4Q8N9R6 151 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 OR4F15Q8NGB8 312 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 OR52E4Q8NGH9 312 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 OR51F2Q8NH61 342 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 OR9G1Q8NH87 305 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 PIGXQ8TBF5 258 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 GPR119Q8TDV5 335 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 TMEM234Q8WY98 164 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 ARPC1AQ92747 370 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 CDS1Q92903 461 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 FAM104AQ969W3 186 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 PPCDCQ96CD2 204 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 C20orf85Q9H1P6 137 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 CRLF2Q9HC73 371 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 CA10Q9NS85 328 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 UFSP2Q9NUQ7 469 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 THUMPD1Q9NXG2 353 aaKnown RBP2.33□□□□□ -2.04
HDAC2-208ENST00000520746 SMPD3Q9NY59 655 aaPredicted RBP2.33□□□□□ -2.04
HDAC2-208ENST00000520746 PCTPQ9UKL6 214 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 MRPS7Q9Y2R9 242 aaKnown RBP2.33□□□□□ -2.04
HDAC2-208ENST00000520746 POLDIP2Q9Y2S7 368 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 UTP11Q9Y3A2 253 aaKnown RBP2.33□□□□□ -2.04
HDAC2-208ENST00000520746 FIS1Q9Y3D6 152 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 RPL36Q9Y3U8 105 aaKnown RBP2.33□□□□□ -2.04
HDAC2-208ENST00000520746 POLR3HQ9Y535 204 aaPredicted RBP2.33□□□□□ -2.04
HDAC2-208ENST00000520746 TIMM22Q9Y584 194 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 SLC25A15Q9Y619 301 aa2.33□□□□□ -2.04
HDAC2-208ENST00000520746 TGP01266 2768 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 ARHGAP21Q5T5U3 1957 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 EML6Q6ZMW3 1958 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 A0A096LNT2 108 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 IGLV3-32A0A0A0MS00 114 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 ISPDA4D126 451 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 FAM159BA6NKW6 160 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 AGPAT2O15120 278 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 EIF3HO15372 352 aaKnown RBP eCLIP2.32□□□□□ -2.04
HDAC2-208ENST00000520746 MAGEB3O15480 346 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 EIF4E2O60573 245 aaKnown RBP2.32□□□□□ -2.04
HDAC2-208ENST00000520746 ERLIN1O75477 346 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 DIRAS1O95057 198 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 MPZL1O95297 269 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 CSTAP01040 98 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 MSMBP08118 114 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 KRT16P08779 473 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 UBTFL6P0CB48 400 aaPredicted RBP2.32□□□□□ -2.04
HDAC2-208ENST00000520746 CHTF8P0CG12 524 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 CD79AP11912 226 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 TCP1P17987 556 aaKnown RBP2.32□□□□□ -2.04
HDAC2-208ENST00000520746 OMGP23515 440 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 CXCR1P25024 350 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 COL8A2P25067 703 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 IVDP26440 423 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 ELK4P28324 431 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 LCN1P31025 176 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 FMO3P31513 532 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 GLP1RP43220 463 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 CCT3P49368 545 aaKnown RBP2.32□□□□□ -2.04
HDAC2-208ENST00000520746 TMEM33P57088 247 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 GNG11P61952 73 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 SLC35A1P78382 337 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms