RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 CLN6Q9NWW5 311 aa7.51□□□□□ -1.21
CTNNA1-221ENST00000520339 SCN3BQ9NY72 215 aa7.51□□□□□ -1.21
CTNNA1-221ENST00000520339 SLC22A13Q9Y226 551 aa7.51□□□□□ -1.21
CTNNA1-221ENST00000520339 POLDIP2Q9Y2S7 368 aa7.51□□□□□ -1.21
CTNNA1-221ENST00000520339 SNX5Q9Y5X3 404 aa7.51□□□□□ -1.21
CTNNA1-221ENST00000520339 A0A1W2PPH5 198 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 A6NIN4 97 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 C17orf98A8MV24 154 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 ZNF670-ZNF695F2Z2N8 137 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 K7N7A8 449 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 F2RL2O00254 374 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 NXPH2O95156 264 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 TK1P04183 234 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 CCL3L1P16619 93 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 COX7A1P24310 79 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 CRHBPP24387 322 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 RPL5P46777 297 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 SLURP1P55000 103 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 DLX6P56179 175 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 IL24Q13007 206 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 C2orf68Q2NKX9 166 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 CNPY1Q3B7I2 92 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 KHDC1LQ5JSQ8 128 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 BCL2L15Q5TBC7 163 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 C11orf88Q6PI97 169 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 SSX6Q7RTT6 188 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 CALHM1Q8IU99 346 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 SPARTQ8N0X7 666 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 CFHR4Q92496 578 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 IL4I1Q96RQ9 567 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 PKIBQ9C010 78 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 RANBP3Q9H6Z4 567 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 RHBDL2Q9NX52 303 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 GTF2A1LQ9UNN4 478 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 TPRKBQ9Y3C4 175 aa7.5□□□□□ -1.21
CTNNA1-221ENST00000520339 hCG_1809904A0A1W2PP81 198 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 A0A1W2PPE2 198 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 A0A1W2PQL4 384 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 A0A1W2PR64 198 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 A0A1W2PRV1 198 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 UBE2QL1A1L167 161 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 F8VVB4 439 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 F8VWA3 439 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 CHST1O43916 411 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 ZNF737O75373 536 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 WBP4O75554 376 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 CD1AP06126 327 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 CHRM2P08172 466 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 CSF1P09603 554 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 M6PRP20645 277 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 HTR1FP30939 366 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 BMXP51813 675 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 COL10A1Q03692 680 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 DCTN2Q13561 401 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 UBE2V2Q15819 145 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 LAIR2Q6ISS4 152 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 CCBE1Q6UXH8 406 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 Q6ZTK2 550 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 LHFPL4Q7Z7J7 247 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 C1QL4Q86Z23 238 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 GID4Q8IVV7 300 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 BATF2Q8N1L9 274 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 BPIFB6Q8NFQ5 453 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 OR4C13Q8NGP0 309 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 RHOXF1Q8NHV9 184 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 APH1BQ8WW43 257 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 Q96MT0 163 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 UQCC2Q9BRT2 126 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 C1orf43Q9BWL3 253 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 C11orf54Q9H0W9 315 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 RAB18Q9NP72 206 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 OR14J1Q9UGF5 321 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 WARS2Q9UGM6 360 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 FOXJ3Q9UPW0 622 aa7.49□□□□□ -1.21
CTNNA1-221ENST00000520339 IGKV1-27A0A075B6S5 117 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 A0A0G2JK05 382 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 FAM230AA0A1W2PPH8 454 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 METTL15A6NJ78 407 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 ODF3BA8MYP8 253 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 XPNPEP2O43895 674 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 MRPS14O60783 128 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 SULT1C4O75897 302 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 RPP14O95059 124 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 TFAP2AP05549 437 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 KRT8P05787 483 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 OR2T7P0C7T2 308 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 GSTT2P0CG29 244 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 GSTT2BP0CG30 244 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 ZNF728P0DKX0 622 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 PIPP12273 146 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 GABRB1P18505 474 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 SNRPGP62308 76 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 LDLRAD2Q5SZI1 272 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 HIST2H2BDQ6DRA6 164 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 ZNF782Q6ZMW2 699 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 Q6ZNX1 250 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 CATSPERDQ86XM0 798 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 DYNAPQ8N1N2 210 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 Q8N2B8 174 aa7.48□□□□□ -1.21
CTNNA1-221ENST00000520339 KLHDC1Q8N7A1 406 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms