RNA–Protein interactions for RNA: ENST00000520119.1

IGHV1-17-201, Transcript of immunoglobulin heavy variable 1-17 (pseudogene), humanhuman

BASIC

Gene IGHV1-17, Length 334 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-17-201ENST00000520119 EXOSC4Q9NPD3 245 aaKnown RBP8.85□□□□□ -0.99
IGHV1-17-201ENST00000520119 FAM53CQ9NYF3 392 aa8.85□□□□□ -0.99
IGHV1-17-201ENST00000520119 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.85□□□□□ -0.99
IGHV1-17-201ENST00000520119 DPM3Q9P2X0 92 aa8.85□□□□□ -0.99
IGHV1-17-201ENST00000520119 HHLA2Q9UM44 414 aa8.85□□□□□ -0.99
IGHV1-17-201ENST00000520119 PCDHGB5Q9Y5G0 923 aa8.85□□□□□ -0.99
IGHV1-17-201ENST00000520119 DAPL1A0PJW8 107 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 SAC3D1A6NKF1 404 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 J3QRE1 110 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 SIRPB1O00241 398 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 SLC16A6O15403 523 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 MMP23AO75900 390 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 OR2H2O95918 312 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 MT-ND2P03891 347 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 HTR1AP08908 422 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 JUNBP17275 347 aaPredicted RBP8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 LMO1P25800 156 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 SNU13P55769 128 aaKnown RBP8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 MEDAGQ5VYS4 303 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 Q6ZPA2 131 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 CAPSLQ8WWF8 208 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 CORO2AQ92828 525 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 CREB3L1Q96BA8 519 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 RNFT2Q96EX2 444 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 MRPL48Q96GC5 212 aaKnown RBP8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 HRASLS5Q96KN8 279 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 MYCBPQ99417 103 aaPredicted RBP8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 COMMD4Q9H0A8 199 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 TAS2R3Q9NYW6 316 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 GSTK1Q9Y2Q3 226 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 ORC6Q9Y5N6 252 aa8.84□□□□□ -0.99
IGHV1-17-201ENST00000520119 IGKV1-12A0A0C4DH73 117 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 SNTNA6NMZ2 147 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 LEUTXA8MZ59 168 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 PIN1P1O15428 100 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 CIB2O75838 187 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 KDM4BO94953 1096 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 IGKV1D-12P01611 117 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 IGLV1-47P01700 117 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 PRB2P02812 416 aaPredicted RBP8.83□□□□□ -1
IGHV1-17-201ENST00000520119 CSN2P05814 226 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 RPSAP08865 295 aaKnown RBP8.83□□□□□ -1
IGHV1-17-201ENST00000520119 CALCBP10092 127 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 CDK2P24941 298 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 CD34P28906 385 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 CEACAM3P40198 252 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 NANOS3P60323 173 aaKnown RBP8.83□□□□□ -1
IGHV1-17-201ENST00000520119 SNRPGP62308 76 aaKnown RBP8.83□□□□□ -1
IGHV1-17-201ENST00000520119 CD83Q01151 205 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 KPNB1Q14974 876 aaKnown RBP8.83□□□□□ -1
IGHV1-17-201ENST00000520119 PRAMEF5Q5TYX0 476 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 SAXO1Q8IYX7 474 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 ACBD7Q8N6N7 88 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 CHST4Q8NCG5 386 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 OR5AU1Q8NGC0 362 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 OR13C3Q8NGS6 347 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 OR13C9Q8NGT0 318 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 SGCDQ92629 289 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 STMN2Q93045 179 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 RFT1Q96AA3 541 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 NECAP2Q9NVZ3 263 aa8.83□□□□□ -1
IGHV1-17-201ENST00000520119 DNAH3Q8TD57 4116 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 ODAMA1E959 279 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 OR4C45A6NMZ5 311 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 J3QLW9 94 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 TOR1AO14656 332 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 ALPLP05186 524 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 ZNF44P15621 663 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 ZNF19P17023 458 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 PTGFRP43088 359 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 GLIPR1P48060 266 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 PRRX1P54821 245 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 LOXL3P58215 753 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 AESQ08117 197 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 ALKBH1Q13686 389 aaKnown RBP8.82□□□□□ -1
IGHV1-17-201ENST00000520119 TMEM95Q3KNT9 176 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 CENPVQ7Z7K6 275 aaPredicted RBP8.82□□□□□ -1
IGHV1-17-201ENST00000520119 WFDC9Q8NEX5 89 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 OR4D6Q8NGJ1 314 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 OR51A4Q8NGJ6 313 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 OR5D14Q8NGL3 314 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 OR10AC1Q8NH08 325 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 MRAPQ8TCY5 172 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 PELI1Q96FA3 418 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 ZCCHC4Q9H5U6 513 aa8.82□□□□□ -1
IGHV1-17-201ENST00000520119 EXOGQ9Y2C4 368 aaKnown RBP8.82□□□□□ -1
IGHV1-17-201ENST00000520119 A0A087X0M5 115 aa8.81□□□□□ -1
IGHV1-17-201ENST00000520119 A0A1B0GX30 115 aa8.81□□□□□ -1
IGHV1-17-201ENST00000520119 ZNF729A6NN14 1252 aaPredicted RBP8.81□□□□□ -1
IGHV1-17-201ENST00000520119 OOSP1A8MZH6 123 aa8.81□□□□□ -1
IGHV1-17-201ENST00000520119 BUB1B-PAK6H3BSN5 160 aa8.81□□□□□ -1
IGHV1-17-201ENST00000520119 M0QZK8 103 aa8.81□□□□□ -1
IGHV1-17-201ENST00000520119 DEGS1O15121 323 aa8.81□□□□□ -1
IGHV1-17-201ENST00000520119 OR2F2O95006 317 aa8.81□□□□□ -1
IGHV1-17-201ENST00000520119 DBTP11182 482 aaKnown RBP8.81□□□□□ -1
IGHV1-17-201ENST00000520119 CD24P25063 80 aa8.81□□□□□ -1
IGHV1-17-201ENST00000520119 SCN1BQ07699 218 aa8.81□□□□□ -1
IGHV1-17-201ENST00000520119 HLA-DRB5Q30154 266 aa8.81□□□□□ -1
IGHV1-17-201ENST00000520119 KRBOX4Q5JUW0 171 aa8.81□□□□□ -1
IGHV1-17-201ENST00000520119 CCDC144NLQ6NUI1 221 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms