RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 RHOFQ9HBH0 211 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 U3KQK5 164 aa2.32□□□□□ -2.04
PTPN12-213ENST00000519553 MIA3Q5JRA6 1907 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 UPK2O00526 184 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 PRMT5O14744 637 aaPredicted RBP2.31□□□□□ -2.04
PTPN12-213ENST00000519553 HLA-AP01891 365 aaKnown RBP2.31□□□□□ -2.04
PTPN12-213ENST00000519553 M6PRP20645 277 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 HTR2CP28335 458 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 GPR176Q14439 515 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 UBE2NLQ5JXB2 153 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 PDPK2PQ6A1A2 396 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 CLEC6AQ6EIG7 209 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 GLYATQ6IB77 296 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 TPGS1Q6ZTW0 290 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 GALNT10Q86SR1 603 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 TCAIMQ8N3R3 496 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 ATPAF2Q8N5M1 289 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 ASCC1Q8N9N2 400 aaKnown RBP2.31□□□□□ -2.04
PTPN12-213ENST00000519553 OR2M3Q8NG83 312 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 OR13C9Q8NGT0 318 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 CACNG8Q8WXS5 425 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 C20orf166-AS1Q96NR2 134 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 ZNF436Q9C0F3 470 aaPredicted RBP2.31□□□□□ -2.04
PTPN12-213ENST00000519553 GAL3ST2Q9H3Q3 398 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 PLEKHA1Q9HB21 404 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 ACOT13Q9NPJ3 140 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 SAMHD1Q9Y3Z3 626 aaKnown RBP2.31□□□□□ -2.04
PTPN12-213ENST00000519553 FADS3Q9Y5Q0 445 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 NOS1P29475 1434 aa2.31□□□□□ -2.04
PTPN12-213ENST00000519553 IGKV1D-37A0A075B6S9 117 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 A0A1B0GXF2 115 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 CD300LBA8K4G0 201 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 IQCF5A8MTL0 148 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 YEATS4O95619 227 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 CD8AP01732 235 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 CECR9P0C854 216 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 MLNP12872 115 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 CBR1P16152 277 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 SPAM1P38567 509 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 MAP3K7CLP57077 242 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 ST13P4Q8IZP2 240 aaPredicted RBP2.3□□□□□ -2.04
PTPN12-213ENST00000519553 SUN5Q8TC36 379 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 RAD51AP1Q96B01 352 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 FMC1Q96HJ9 113 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 PYURFQ96I23 114 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 KLF6Q99612 283 aaPredicted RBP2.3□□□□□ -2.04
PTPN12-213ENST00000519553 UTP23Q9BRU9 249 aaKnown RBP2.3□□□□□ -2.04
PTPN12-213ENST00000519553 OR52A5Q9H2C5 316 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 SPACA1Q9HBV2 294 aa2.3□□□□□ -2.04
PTPN12-213ENST00000519553 PSIP1O75475 530 aaKnown RBP2.29□□□□□ -2.04
PTPN12-213ENST00000519553 CCL2P13500 99 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 CNTFRP26992 372 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 ARR3P36575 388 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 KCNJ3P48549 501 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 XRCC4Q13426 336 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 VAMP3Q15836 100 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 USF2Q15853 346 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-213ENST00000519553 CCDC122Q5T0U0 273 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 ERICH5Q6P6B1 374 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 COPS6Q7L5N1 327 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 FAM19A1Q7Z5A9 133 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 MARCH3Q86UD3 253 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 CYP4Z1Q86W10 505 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 SYCE1Q8N0S2 351 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 Q8NDZ9 215 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 ZNF738Q8NE65 137 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 OR51Q1Q8NH59 317 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 MAL2Q969L2 176 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 TM6SF2Q9BZW4 377 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 POMKQ9H5K3 350 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 ANKHQ9HCJ1 492 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 OR5V1Q9UGF6 321 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 SLC22A14Q9Y267 594 aa2.29□□□□□ -2.04
PTPN12-213ENST00000519553 RBFOX3A6NFN3 312 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 SOD3P08294 240 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 GTF2F2P13984 249 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 CTLA4P16410 223 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 LGALS7P47929 136 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 ATP5J2P56134 94 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 KRTAP12-1P59990 96 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 BCL2A1Q16548 175 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 ZNF181Q2M3W8 571 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 LYZL2Q7Z4W2 148 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 OR6K3Q8NGY3 331 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 CLHC1Q8NHS4 586 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 LRRC20Q8TCA0 184 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 ACBD6Q9BR61 282 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 BEX2Q9BXY8 128 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 RAB1BQ9H0U4 201 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 TREM1Q9NP99 234 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 CHMP5Q9NZZ3 219 aa2.28□□□□□ -2.04
PTPN12-213ENST00000519553 ERICH2A1L162 156 aa2.27□□□□□ -2.05
PTPN12-213ENST00000519553 J3QKU1 62 aa2.27□□□□□ -2.05
PTPN12-213ENST00000519553 RFXANKO14593 260 aa2.27□□□□□ -2.05
PTPN12-213ENST00000519553 LCN1P31025 176 aa2.27□□□□□ -2.05
PTPN12-213ENST00000519553 CCL23P55773 120 aa2.27□□□□□ -2.05
PTPN12-213ENST00000519553 C18orf21Q32NC0 220 aaPredicted RBP2.27□□□□□ -2.05
PTPN12-213ENST00000519553 ACTBL2Q562R1 376 aa2.27□□□□□ -2.05
PTPN12-213ENST00000519553 CD302Q8IX05 232 aa2.27□□□□□ -2.05
PTPN12-213ENST00000519553 ANGPTL6Q8NI99 470 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms