RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 MAGT1Q9H0U3 335 aa14.27□□□□□ -0.12
PCDHGA11-202ENST00000518882 NIT2Q9NQR4 276 aa14.27□□□□□ -0.12
PCDHGA11-202ENST00000518882 SLC7A10Q9NS82 523 aa14.27□□□□□ -0.12
PCDHGA11-202ENST00000518882 ZNF407Q9C0G0 2248 aa14.27□□□□□ -0.12
PCDHGA11-202ENST00000518882 ZNHIT1O43257 154 aa14.27□□□□□ -0.13
PCDHGA11-202ENST00000518882 FGF5P12034 268 aa14.27□□□□□ -0.13
PCDHGA11-202ENST00000518882 EDN3P14138 238 aa14.27□□□□□ -0.13
PCDHGA11-202ENST00000518882 FUT3P21217 361 aa14.27□□□□□ -0.13
PCDHGA11-202ENST00000518882 RGS19P49795 217 aa14.27□□□□□ -0.13
PCDHGA11-202ENST00000518882 CEACAM16Q2WEN9 425 aa14.27□□□□□ -0.13
PCDHGA11-202ENST00000518882 SPSB3Q6PJ21 355 aa14.27□□□□□ -0.13
PCDHGA11-202ENST00000518882 TBC1D26Q86UD7 250 aa14.27□□□□□ -0.13
PCDHGA11-202ENST00000518882 ODF3L1Q8IXM7 274 aa14.27□□□□□ -0.13
PCDHGA11-202ENST00000518882 OR2G3Q8NGZ4 309 aa14.27□□□□□ -0.13
PCDHGA11-202ENST00000518882 SLAMF9Q96A28 289 aa14.27□□□□□ -0.13
PCDHGA11-202ENST00000518882 MALSU1Q96EH3 234 aa14.27□□□□□ -0.13
PCDHGA11-202ENST00000518882 FOXB1Q99853 325 aa14.27□□□□□ -0.13
PCDHGA11-202ENST00000518882 SLC7A11Q9UPY5 501 aa14.27□□□□□ -0.13
PCDHGA11-202ENST00000518882 A0A1B0GW64 132 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 SSSCA1O60232 199 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 CLN5O75503 358 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 CDS2O95674 445 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 CYC1P08574 325 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 ITGA3P26006 1051 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 NKX2-1P43699 371 aaPredicted RBP14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 STARD6P59095 220 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 OR8B8Q15620 311 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 EXT1Q16394 746 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 CXorf66Q5JRM2 361 aaPredicted RBP14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 SLC25A26Q70HW3 274 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 RPS19BP1Q86WX3 136 aaKnown RBP14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 LFNGQ8NES3 379 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 MR1Q95460 341 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 GLRX2Q9NS18 164 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 WNT16Q9UBV4 365 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 CELSR3Q9NYQ7 3312 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 PROB1E7EW31 1015 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 CXCL13O43927 109 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 CARD18P57730 90 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 TRIM61Q5EBN2 209 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 SOHLH1Q5JUK2 328 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 AAED1Q7RTV5 226 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 SUMF2Q8NBJ7 301 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 TCEAL3Q969E4 200 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 HS3ST6Q96QI5 342 aa14.26□□□□□ -0.13
PCDHGA11-202ENST00000518882 ZNF816-ZNF321PA0A0X1KG74 233 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 PITX3O75364 302 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 TMEM50AO95807 157 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 EPHA1P21709 976 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 HAGHQ16775 308 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 ZNF818PQ6ZRF7 136 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 SELENOHQ8IZQ5 122 aaKnown RBP14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 OR14L1PQ8NHC6 308 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 M1APQ8TC57 530 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 TMEM56Q96MV1 263 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 UBE2J1Q9Y385 318 aaPredicted RBP14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 TMEM56-RWDD3S4R434 201 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 RBFOX3A6NFN3 312 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 GJE1A6NN92 205 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 SLC33A1O00400 549 aaPredicted RBP14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 TXNL1O43396 289 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 NXPH3O95157 252 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 OR2C1O95371 312 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 RFPL3SP0C7P2 107 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 MAS1LP35410 378 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 MLF1P58340 268 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 ZNF266Q14584 549 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 SPIN3Q5JUX0 258 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 SLC23A3Q6PIS1 610 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 DPPA2Q7Z7J5 298 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 TMEM252Q8N6L7 170 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 EXTL1Q92935 676 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 PLSCR2Q9NRY7 297 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 LYRM2Q9NU23 88 aaPredicted RBP14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 ZNF391Q9UJN7 358 aa14.25□□□□□ -0.13
PCDHGA11-202ENST00000518882 IGKV1D-13A0A0B4J2D9 117 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 CCDC163A0A0D9SF12 145 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 AP4M1O00189 453 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 ADAM20O43506 726 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 CST7O76096 145 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 SCTP09683 121 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 IGKV1-13P0DP09 117 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 CCL4P13236 92 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 RND3P61587 244 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 HEPN1Q6WQI6 88 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 ZNF695Q8IW36 515 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 AGBL5Q8NDL9 886 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 OR5C1Q8NGR4 320 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 NAT6Q93015 286 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 CRIM1Q9NZV1 1036 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 ZNF727A8MUV8 499 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 RPL36A-HNRNPH2H7BZ11 118 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 PPIHO43447 177 aaKnown RBP14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 BCL3P20749 454 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 CLDN15P56746 228 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 RAB1AP62820 205 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 RUNX1Q01196 453 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 HERPUD1Q15011 391 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 HIKESHIQ53FT3 197 aa14.24□□□□□ -0.13
PCDHGA11-202ENST00000518882 NCMAPQ5T1S8 102 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms