RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 UBDO15205 165 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 FABP7O15540 132 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 ENSAO43768 121 aaKnown RBP2.11□□□□□ -2.07
HERC4-215ENST00000515753 CTDNEP1O95476 244 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 MOSP00540 346 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 IGLV3-19P01714 112 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 HLA-DPB1P04440 258 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 RD3LP0DJH9 198 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 HLA-EP13747 358 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 CXCR1P25024 350 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 MAGEA2P43356 314 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 ACOT2P49753 483 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 RPL14P50914 215 aaKnown RBP2.11□□□□□ -2.07
HERC4-215ENST00000515753 STX17P56962 302 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 RAB38P57729 211 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 MTPNP58546 118 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 MYL6P60660 151 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 MAGOHP61326 146 aaKnown RBP2.11□□□□□ -2.07
HERC4-215ENST00000515753 GINS1Q14691 196 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 TRAM1Q15629 374 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 EXOC3L4Q17RC7 722 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 TFDP3Q5H9I0 405 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 TIMM23BQ5SRD1 257 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 HES5Q5TA89 166 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 SDHAF4Q5VUM1 108 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 METTL21CQ5VZV1 264 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 RTL4Q6ZR62 310 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 PRSS58Q8IYP2 241 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 CEND1Q8N111 149 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 ATPAF2Q8N5M1 289 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 ATP6V1C2Q8NEY4 427 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 OR4K17Q8NGC6 315 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 OR1S1Q8NH92 325 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 PIFOQ8TCI5 191 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 RXFP2Q8WXD0 754 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 CDS1Q92903 461 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 TCEAL3Q969E4 200 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 CCDC127Q96BQ5 260 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 ZNF799Q96GE5 643 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 ALS2CR12Q96Q35 445 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 OR2M2Q96R28 347 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 APOL4Q9BPW4 351 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 RSG1Q9BU20 258 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 ING2Q9H160 280 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 DSN1Q9H410 356 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 EDA2RQ9HAV5 297 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 TMEM27Q9HBJ8 222 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 ABCB9Q9NP78 766 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 ASCL3Q9NQ33 180 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 IFT46Q9NQC8 304 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 USE1Q9NZ43 259 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 VAX2Q9UIW0 290 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 PSG8Q9UQ74 426 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 TRAPPC4Q9Y296 219 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 MICAL3Q7RTP6 2002 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 TET1Q8NFU7 2136 aa2.11□□□□□ -2.07
HERC4-215ENST00000515753 XIRP2A4UGR9 3374 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 IGHV1OR15-9A0A0B4J2B8 117 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 PLAC8L1A1L4L8 177 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 FAM92AA1XBS5 289 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 PINLYPA6NC86 204 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 TMX2-CTNND1H3BSU7 103 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 PANO1I0J062 215 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 J3QKU1 62 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 PSPHP1O15172 72 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 SLC31A1O15431 190 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 SHOX2O60902 331 aaPredicted RBP2.1□□□□□ -2.07
HERC4-215ENST00000515753 SUPT3HO75486 399 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 SNAP29O95721 258 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 ORM1P02763 201 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 ZNF35P13682 527 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 FUT3P21217 361 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 GGT2P36268 569 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 TALDO1P37837 337 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 CDC34P49427 236 aaPredicted RBP2.1□□□□□ -2.07
HERC4-215ENST00000515753 NDUFA8P51970 172 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 RHOAP61586 193 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 CACNG7P62955 275 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 ARG2P78540 354 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 MRPS15P82914 257 aaKnown RBP2.1□□□□□ -2.07
HERC4-215ENST00000515753 IFITM3Q01628 133 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 PRKCDQ05655 676 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 RAB31Q13636 194 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 IRF4Q15306 451 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 TRIP13Q15645 432 aaPredicted RBP2.1□□□□□ -2.07
HERC4-215ENST00000515753 ZNHIT3Q15649 155 aaPredicted RBP2.1□□□□□ -2.07
HERC4-215ENST00000515753 TMEM183BQ1AE95 376 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 RSPO1Q2MKA7 263 aaPredicted RBP2.1□□□□□ -2.07
HERC4-215ENST00000515753 ORMDL2Q53FV1 153 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 CDKL4Q5MAI5 379 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 NIPAL1Q6NVV3 410 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 C12orf56Q8IXR9 622 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 TMEM183AQ8IXX5 376 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 CYP4Z2PQ8N1L4 340 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 SUMF2Q8NBJ7 301 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 LFNGQ8NES3 379 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 DYNC2LI1Q8TCX1 351 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 SFXN5Q8TD22 340 aa2.1□□□□□ -2.07
HERC4-215ENST00000515753 RNASEH2CQ8TDP1 164 aaKnown RBP2.1□□□□□ -2.07
HERC4-215ENST00000515753 ABHD3Q8WU67 409 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms