RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 HMG20AQ9NP66 347 aa12.43□□□□□ -0.42
LMNA-223ENST00000515459 LINC00527Q9UJ94 153 aa12.43□□□□□ -0.42
LMNA-223ENST00000515459 ZNF729A6NN14 1252 aaPredicted RBP12.42□□□□□ -0.42
LMNA-223ENST00000515459 CCL24O00175 119 aa12.42□□□□□ -0.42
LMNA-223ENST00000515459 FGF16O43320 207 aa12.42□□□□□ -0.42
LMNA-223ENST00000515459 TMEM11P17152 192 aa12.42□□□□□ -0.42
LMNA-223ENST00000515459 LUMP51884 338 aaPredicted RBP12.42□□□□□ -0.42
LMNA-223ENST00000515459 HES1Q14469 280 aa12.42□□□□□ -0.42
LMNA-223ENST00000515459 C9orf66Q5T8R8 295 aa12.42□□□□□ -0.42
LMNA-223ENST00000515459 SSX6Q7RTT6 188 aa12.42□□□□□ -0.42
LMNA-223ENST00000515459 SLC35E3Q7Z769 313 aa12.42□□□□□ -0.42
LMNA-223ENST00000515459 FOXRED2Q8IWF2 684 aa12.42□□□□□ -0.42
LMNA-223ENST00000515459 OR56B4Q8NH76 319 aa12.42□□□□□ -0.42
LMNA-223ENST00000515459 RAX2Q96IS3 184 aa12.42□□□□□ -0.42
LMNA-223ENST00000515459 PRR25Q96S07 402 aa12.42□□□□□ -0.42
LMNA-223ENST00000515459 AMMECR1Q9Y4X0 333 aaPredicted RBP12.42□□□□□ -0.42
LMNA-223ENST00000515459 AQP12BA6NM10 295 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 IGHG2P01859 326 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 CSN2P05814 226 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 NFYBP25208 207 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 C17orf58Q2M2W7 97 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 KRBOX4Q5JUW0 171 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 UTF1Q5T230 341 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 AADACL4Q5VUY2 407 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 LHFPL2Q6ZUX7 228 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 AQP12AQ8IXF9 295 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 STPG2Q8N412 459 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 DRAM1Q8N682 238 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 TCEANCQ8N8B7 351 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 OR5M8Q8NGP6 311 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 NSL1Q96IY1 281 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 TBX5Q99593 518 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 ASCL2Q99929 193 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 COMMD4Q9H0A8 199 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 ING3Q9NXR8 418 aa12.41□□□□□ -0.42
LMNA-223ENST00000515459 IGKV1-9A0A0C4DH69 117 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 LOC107986453A0A1B0GWG9 222 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 METTL15A6NJ78 407 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 M0R129 80 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 UBCP0CG48 685 aaKnown RBP12.4□□□□□ -0.42
LMNA-223ENST00000515459 ZNF44P15621 663 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 PRKACBP22694 351 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 ECI1P42126 302 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 EFNB1P98172 346 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 SCN1BQ07699 218 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 PDZK1IP1Q13113 114 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 CASC10Q5T4H9 136 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 TEX38Q6PEX7 206 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 GID4Q8IVV7 300 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 PRSS35Q8N3Z0 413 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 OR8U1Q8NH10 309 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 TMEM163Q8TC26 289 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 COQ2Q96H96 371 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 KIRREL1Q96J84 757 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 HRASLS5Q96KN8 279 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 OR6C3Q9NZP0 311 aa12.4□□□□□ -0.42
LMNA-223ENST00000515459 IGKV1-12A0A0C4DH73 117 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 KBTBD11-OT1A0A1B0GTJ5 212 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 A0A1W2PPI3 338 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 A0A1W2PQL4 384 aaPredicted RBP12.39□□□□□ -0.43
LMNA-223ENST00000515459 J3QR06 171 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 SULT1C4O75897 302 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 FAM107AO95990 144 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 IGKV1D-12P01611 117 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 OR2T7P0C7T2 308 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 ATF1P18846 271 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 RAB7AP51149 207 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 BNIP1Q12981 228 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 MADCAM1Q13477 382 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 HNF4GQ14541 408 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 ATXN7L3Q14CW9 347 aaPredicted RBP12.39□□□□□ -0.43
LMNA-223ENST00000515459 DEFB136Q30KP8 78 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 UTS2BQ765I0 119 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 CHST4Q8NCG5 386 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 MUC7Q8TAX7 377 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 SPSB1Q96BD6 273 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 ADAT3Q96EY9 351 aaPredicted RBP12.39□□□□□ -0.43
LMNA-223ENST00000515459 DCLRE1BQ9H816 532 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 STAB2Q8WWQ8 2551 aa12.39□□□□□ -0.43
LMNA-223ENST00000515459 SLC33A1O00400 549 aaPredicted RBP12.38□□□□□ -0.43
LMNA-223ENST00000515459 KDM4BO94953 1096 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 IGKV1D-33P01593 117 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 IGKV1-33P01594 117 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 RPLP1P05386 114 aaKnown RBP12.38□□□□□ -0.43
LMNA-223ENST00000515459 OCM2P0CE71 109 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 OCMP0CE72 109 aaPredicted RBP12.38□□□□□ -0.43
LMNA-223ENST00000515459 CALB2P22676 271 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 CHATP28329 748 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 DAPP51397 102 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 KIR2DS1Q14954 304 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 PNLIPRP3Q17RR3 467 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 Q6P435 159 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 FAHD1Q6P587 224 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 RDH10Q8IZV5 341 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 OR8H3Q8N146 312 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 ZNF565Q8N9K5 539 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 HAVCR2Q8TDQ0 301 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 RFT1Q96AA3 541 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 NRBF2Q96F24 287 aa12.38□□□□□ -0.43
LMNA-223ENST00000515459 OPALINQ96PE5 141 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms