RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 KIR3DL2P43630 455 aa11.93□□□□□ -0.5
DDR1-278ENST00000515233 SNU13P55769 128 aaKnown RBP11.93□□□□□ -0.5
DDR1-278ENST00000515233 MRPL41Q8IXM3 137 aaKnown RBP11.93□□□□□ -0.5
DDR1-278ENST00000515233 OR10H4Q8NGA5 316 aa11.93□□□□□ -0.5
DDR1-278ENST00000515233 OR51D1Q8NGF3 324 aa11.93□□□□□ -0.5
DDR1-278ENST00000515233 OR4D6Q8NGJ1 314 aa11.93□□□□□ -0.5
DDR1-278ENST00000515233 BCAS4Q8TDM0 211 aa11.93□□□□□ -0.5
DDR1-278ENST00000515233 FGGYQ96C11 551 aa11.93□□□□□ -0.5
DDR1-278ENST00000515233 ODAMA1E959 279 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 PSMB11A5LHX3 300 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 FAM172BPA6NC97 362 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 SH2D7A6NKC9 451 aaPredicted RBP11.92□□□□□ -0.5
DDR1-278ENST00000515233 ZNF729A6NN14 1252 aaPredicted RBP11.92□□□□□ -0.5
DDR1-278ENST00000515233 MT-ND2P03891 347 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 FAM106CPP0CH98 169 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 CGB3P0DN86 165 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 CGB7P0DN87 165 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 SLC6A1P30531 599 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 HOXD3P31249 432 aaPredicted RBP11.92□□□□□ -0.5
DDR1-278ENST00000515233 ATP6V1E1P36543 226 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 PTGFRP43088 359 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 THBS3P49746 956 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 ZNF85Q03923 595 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 CD69Q07108 199 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 ATP6AP1Q15904 470 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 C17orf58Q2M2W7 97 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 KHDC1LQ5JSQ8 128 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 Q6P435 159 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 ETV3LQ6ZN32 361 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 KCTD20Q7Z5Y7 419 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 ZDHHC13Q8IUH4 622 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 SAXO1Q8IYX7 474 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 CHST4Q8NCG5 386 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 OR8J1Q8NGP2 316 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 OR2G2Q8NGZ5 317 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 DPF1Q92782 380 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 SLC7A6OSQ96CW6 309 aaPredicted RBP11.92□□□□□ -0.5
DDR1-278ENST00000515233 WWC2-AS2Q96NR7 200 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 OPALINQ96PE5 141 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 MBOAT4Q96T53 435 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 MCRIP2Q9BUT9 160 aaKnown RBP11.92□□□□□ -0.5
DDR1-278ENST00000515233 GABARAPL1Q9H0R8 117 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 FRRS1LQ9P0K9 344 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 GNG8Q9UK08 70 aa11.92□□□□□ -0.5
DDR1-278ENST00000515233 APOL3O95236 402 aa11.91□□□□□ -0.5
DDR1-278ENST00000515233 VSIG8P0DPA2 414 aa11.91□□□□□ -0.5
DDR1-278ENST00000515233 POLR2IP36954 125 aaKnown RBP11.91□□□□□ -0.5
DDR1-278ENST00000515233 C9orf152Q5JTZ5 239 aa11.91□□□□□ -0.5
DDR1-278ENST00000515233 KRBOX4Q5JUW0 171 aa11.91□□□□□ -0.5
DDR1-278ENST00000515233 FDX2Q6P4F2 183 aa11.91□□□□□ -0.5
DDR1-278ENST00000515233 FAM220AQ7Z4H9 259 aa11.91□□□□□ -0.5
DDR1-278ENST00000515233 OR9G1Q8NH87 305 aa11.91□□□□□ -0.5
DDR1-278ENST00000515233 EME1Q96AY2 570 aa11.91□□□□□ -0.5
DDR1-278ENST00000515233 COQ2Q96H96 371 aa11.91□□□□□ -0.5
DDR1-278ENST00000515233 PCDHB16Q9NRJ7 776 aa11.91□□□□□ -0.5
DDR1-278ENST00000515233 ZFP57Q9NU63 452 aa11.91□□□□□ -0.5
DDR1-278ENST00000515233 MOB4Q9Y3A3 225 aa11.91□□□□□ -0.5
DDR1-278ENST00000515233 HSPE1-MOB4S4R3N1 261 aa11.91□□□□□ -0.5
DDR1-278ENST00000515233 RYR3Q15413 4870 aa11.91□□□□□ -0.5
DDR1-278ENST00000515233 KBTBD11-OT1A0A1B0GTJ5 212 aa11.9□□□□□ -0.5
DDR1-278ENST00000515233 SLC33A1O00400 549 aaPredicted RBP11.9□□□□□ -0.5
DDR1-278ENST00000515233 ZNF44P15621 663 aa11.9□□□□□ -0.5
DDR1-278ENST00000515233 ZNF20P17024 532 aa11.9□□□□□ -0.5
DDR1-278ENST00000515233 OR3A4PP47883 348 aa11.9□□□□□ -0.5
DDR1-278ENST00000515233 CCR9P51686 369 aa11.9□□□□□ -0.5
DDR1-278ENST00000515233 RPL23AP62750 156 aaKnown RBP11.9□□□□□ -0.5
DDR1-278ENST00000515233 DCTN2Q13561 401 aaKnown RBP11.9□□□□□ -0.5
DDR1-278ENST00000515233 TP53I3Q53FA7 332 aa11.9□□□□□ -0.5
DDR1-278ENST00000515233 ZNF565Q8N9K5 539 aa11.9□□□□□ -0.5
DDR1-278ENST00000515233 CHPT1Q8WUD6 406 aa11.9□□□□□ -0.5
DDR1-278ENST00000515233 RFKQ969G6 155 aa11.9□□□□□ -0.5
DDR1-278ENST00000515233 RFT1Q96AA3 541 aa11.9□□□□□ -0.5
DDR1-278ENST00000515233 KIRREL1Q96J84 757 aa11.9□□□□□ -0.5
DDR1-278ENST00000515233 CIB1Q99828 191 aa11.9□□□□□ -0.5
DDR1-278ENST00000515233 NCOR1P1Q9H4R4 102 aa11.9□□□□□ -0.5
DDR1-278ENST00000515233 OR6C3Q9NZP0 311 aa11.9□□□□□ -0.5
DDR1-278ENST00000515233 ZMAT5Q9UDW3 170 aaKnown RBP11.9□□□□□ -0.5
DDR1-278ENST00000515233 J3QR06 171 aa11.89□□□□□ -0.51
DDR1-278ENST00000515233 OCM2P0CE71 109 aa11.89□□□□□ -0.51
DDR1-278ENST00000515233 OCMP0CE72 109 aaPredicted RBP11.89□□□□□ -0.51
DDR1-278ENST00000515233 FASP25445 335 aa11.89□□□□□ -0.51
DDR1-278ENST00000515233 MYCNOSP40205 109 aa11.89□□□□□ -0.51
DDR1-278ENST00000515233 NANOS3P60323 173 aaKnown RBP11.89□□□□□ -0.51
DDR1-278ENST00000515233 SCN1BQ07699 218 aa11.89□□□□□ -0.51
DDR1-278ENST00000515233 RBM39Q14498 530 aaKnown RBP11.89□□□□□ -0.51
DDR1-278ENST00000515233 CDK5R1Q15078 307 aa11.89□□□□□ -0.51
DDR1-278ENST00000515233 UTF1Q5T230 341 aa11.89□□□□□ -0.51
DDR1-278ENST00000515233 OR2W3Q7Z3T1 314 aa11.89□□□□□ -0.51
DDR1-278ENST00000515233 RNF144BQ7Z419 303 aa11.89□□□□□ -0.51
DDR1-278ENST00000515233 ZNF329Q86UD4 541 aa11.89□□□□□ -0.51
DDR1-278ENST00000515233 OR51T1Q8NGJ9 327 aa11.89□□□□□ -0.51
DDR1-278ENST00000515233 RPEQ96AT9 228 aa11.89□□□□□ -0.51
DDR1-278ENST00000515233 P2RX4Q99571 388 aa11.89□□□□□ -0.51
DDR1-278ENST00000515233 ZNF649Q9BS31 505 aa11.89□□□□□ -0.51
DDR1-278ENST00000515233 LINC00574Q9H8X3 128 aa11.89□□□□□ -0.51
DDR1-278ENST00000515233 AMMECR1Q9Y4X0 333 aaPredicted RBP11.89□□□□□ -0.51
DDR1-278ENST00000515233 TENM3Q9P273 2699 aa11.88□□□□□ -0.51
DDR1-278ENST00000515233 DEGS1O15121 323 aa11.88□□□□□ -0.51
DDR1-278ENST00000515233 FGF16O43320 207 aa11.88□□□□□ -0.51
DDR1-278ENST00000515233 SNRNP70P08621 437 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms