RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 CLDN6P56747 220 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 H2BFSP57053 126 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 HIST1H3AP68431 136 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 H3F3AP84243 136 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 NAAAQ02083 359 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 SPOCK1Q08629 439 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 ECH1Q13011 328 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 PLA2G7Q13093 441 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 DHRS2Q13268 280 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 SURF2Q15527 256 aaPredicted RBP3.19□□□□□ -1.9
CAST-242ENST00000515063 STK11Q15831 433 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 CDNFQ49AH0 187 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 LY6G6FQ5SQ64 297 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 HIST2H3PS2Q5TEC6 136 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 SLC35E4Q6ICL7 350 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 FAAP20Q6NZ36 180 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 C11orf88Q6PI97 169 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 ACOT7LQ6ZUV0 252 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 HIST2H3AQ71DI3 136 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 Q7L0L9 218 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 LHFPL1Q86WI0 220 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 TMEM17Q86X19 198 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 HOGA1Q86XE5 327 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 CCDC36Q8IYA8 594 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 UBALD2Q8IYN6 164 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 GTPBP8Q8N3Z3 284 aaPredicted RBP3.19□□□□□ -1.9
CAST-242ENST00000515063 JAGN1Q8N5M9 183 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 STEAP2Q8NFT2 490 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 OR4K17Q8NGC6 315 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 OR4D10Q8NGI6 311 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 OR4D6Q8NGJ1 314 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 OR51A2Q8NGJ7 313 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 OR52B4Q8NGK2 314 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 OR13C8Q8NGS7 320 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 OR10R2Q8NGX6 335 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 OR5R1Q8NH85 324 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 SAP25Q8TEE9 199 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 PP6455Q8WZ26 134 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 TMEM54Q969K7 222 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 FGGYQ96C11 551 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 CPNE2Q96FN4 548 aaPredicted RBP3.19□□□□□ -1.9
CAST-242ENST00000515063 RASL10BQ96S79 203 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 PHB2Q99623 299 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 SRSF8Q9BRL6 282 aaKnown RBP3.19□□□□□ -1.9
CAST-242ENST00000515063 NAA11Q9BSU3 229 aaPredicted RBP3.19□□□□□ -1.9
CAST-242ENST00000515063 TM2D1Q9BX74 207 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 ANGPTL4Q9BY76 406 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 CHIAQ9BZP6 476 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 NMES1Q9C002 83 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 MFFQ9GZY8 342 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 ARL6Q9H0F7 186 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 CST11Q9H112 138 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 LPAR5Q9H1C0 372 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 TMEM185BQ9H7F4 350 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 METTL7AQ9H8H3 244 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 BEX1Q9HBH7 125 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 IFT46Q9NQC8 304 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 CENPMQ9NSP4 180 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 RDH8Q9NYR8 311 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 ZNF391Q9UJN7 358 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 KLK13Q9UKR3 277 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 TNFSF18Q9UNG2 199 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 GPR132Q9UNW8 380 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 MRPS18CQ9Y3D5 142 aaKnown RBP3.19□□□□□ -1.9
CAST-242ENST00000515063 FLVCR1Q9Y5Y0 555 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 LHFPL6Q9Y693 200 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 CACNA1CQ13936 2221 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 ABCA7Q8IZY2 2146 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 KNL1Q8NG31 2342 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 FXYD6-FXYD2A0A087WZ82 144 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 TRAV14DV4A0A0A6YYC5 116 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 IGHV5-10-1A0A0J9YXX1 117 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 C9orf170A2RU37 121 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 RAB19A4D1S5 217 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 TMEM235A6NFC5 223 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 OR5H14A6NHG9 310 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 FOXI3A8MTJ6 420 aaPredicted RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 SERPINE3A8MV23 424 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 F8VVB4 439 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 F8VWA3 439 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 TEX46H3BTG2 121 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 J3QR06 171 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 MFNGO00587 321 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 ARPC5O15511 151 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 RRP8O43159 456 aaKnown RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 BCL2L11O43521 198 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 SYNGR3O43761 229 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 ZNF354AO60765 605 aaPredicted RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 MTRF1O75570 445 aaKnown RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 DHRS3O75911 302 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 STK17BO94768 372 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 TOXO94900 526 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 WDPCPO95876 746 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 IGHV4-39P01824 125 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 IFNA6P05013 189 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 KLK3P07288 261 aaPredicted RBP3.18□□□□□ -1.9
CAST-242ENST00000515063 CFC1BP0CG36 223 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 CFC1P0CG37 223 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 ICAM2P13598 275 aa3.18□□□□□ -1.9
CAST-242ENST00000515063 HIST1H1DP16402 221 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms