RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 CCRL2O00421 344 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 TCF21O43680 179 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 GTF2F2P13984 249 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 RBM11P57052 281 aaKnown RBP11.45□□□□□ -0.58
USP46-209ENST00000514536 ERVFRD-1P60508 538 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 METAP1DQ6UB28 335 aaPredicted RBP11.45□□□□□ -0.58
USP46-209ENST00000514536 SUCNR1Q9BXA5 334 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 METTL8Q9H825 291 aaKnown RBP11.45□□□□□ -0.58
USP46-209ENST00000514536 ZNF581Q9P0T4 197 aa11.45□□□□□ -0.58
USP46-209ENST00000514536 AK6Q9Y3D8 172 aaKnown RBP11.45□□□□□ -0.58
USP46-209ENST00000514536 SVEP1Q4LDE5 3571 aa11.44□□□□□ -0.58
USP46-209ENST00000514536 TRAV24A0A0B4J272 114 aa11.44□□□□□ -0.58
USP46-209ENST00000514536 IGHV1-69DA0A0B4J2H0 117 aa11.44□□□□□ -0.58
USP46-209ENST00000514536 HSPB6O14558 160 aa11.44□□□□□ -0.58
USP46-209ENST00000514536 GEMIN2O14893 280 aaKnown RBP11.44□□□□□ -0.58
USP46-209ENST00000514536 IGHV1-69P01742 117 aa11.44□□□□□ -0.58
USP46-209ENST00000514536 PRTN3P24158 256 aa11.44□□□□□ -0.58
USP46-209ENST00000514536 CALRP27797 417 aaKnown RBP11.44□□□□□ -0.58
USP46-209ENST00000514536 MEF2CQ06413 473 aaPredicted RBP11.44□□□□□ -0.58
USP46-209ENST00000514536 AESQ08117 197 aa11.44□□□□□ -0.58
USP46-209ENST00000514536 KLRD1Q13241 179 aa11.44□□□□□ -0.58
USP46-209ENST00000514536 NEDD8Q15843 81 aa11.44□□□□□ -0.58
USP46-209ENST00000514536 PAN3Q58A45 887 aaKnown RBP11.44□□□□□ -0.58
USP46-209ENST00000514536 NHLRC3Q5JS37 347 aa11.44□□□□□ -0.58
USP46-209ENST00000514536 C1orf100Q5SVJ3 147 aa11.44□□□□□ -0.58
USP46-209ENST00000514536 C11orf42Q8N5U0 333 aa11.44□□□□□ -0.58
USP46-209ENST00000514536 TNFRSF14Q92956 283 aa11.44□□□□□ -0.58
USP46-209ENST00000514536 C1orf147Q96MC9 270 aaPredicted RBP11.44□□□□□ -0.58
USP46-209ENST00000514536 BANF2Q9H503 90 aa11.44□□□□□ -0.58
USP46-209ENST00000514536 ATRQ13535 2644 aa11.44□□□□□ -0.58
USP46-209ENST00000514536 COL6A5A8TX70 2615 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 TRDV1A0A1B0GX56 115 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 A0A1W2PRD5 423 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 A0A1W2PRF3 423 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 A0A1W2PRM7 423 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 hADV38S2A0JD32 116 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 RNASEK-C17orf49H0YIS7 233 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 OR7C1O76099 320 aaPredicted RBP11.43□□□□□ -0.58
USP46-209ENST00000514536 VENTXO95231 258 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 ZNF728P0DKX0 622 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 CD37P11049 281 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 ERP29P30040 261 aaKnown RBP11.43□□□□□ -0.58
USP46-209ENST00000514536 GLIPR1P48060 266 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 P2RX3P56373 397 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 BPIFB3P59826 476 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 ATXN7L3Q14CW9 347 aaPredicted RBP11.43□□□□□ -0.58
USP46-209ENST00000514536 TAF9Q16594 264 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 CD200R1LQ6Q8B3 271 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 C9orf139Q6ZV77 190 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 TCF23Q7RTU1 214 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 SIGLECL1Q8N7X8 197 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 TMEM104Q8NE00 496 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 GFI1Q99684 422 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 UNKLQ9H9P5 680 aaKnown RBP11.43□□□□□ -0.58
USP46-209ENST00000514536 MXRA5Q9NR99 2828 aa11.43□□□□□ -0.58
USP46-209ENST00000514536 A0A0A6YYJ9 748 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 hCG_1809904A0A1W2PP81 198 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 A0A1W2PPE2 198 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 A0A1W2PR64 198 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 A0A1W2PRV1 198 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 FUOMA2VDF0 154 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 CRTAPO75718 401 aaPredicted RBP11.42□□□□□ -0.58
USP46-209ENST00000514536 TNFAIP8O95379 198 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 HTR2CP28335 458 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 DLX6P56179 175 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 KRBOX4Q5JUW0 171 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 ATAD3CQ5T2N8 411 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 SYT6Q5T7P8 510 aaPredicted RBP11.42□□□□□ -0.58
USP46-209ENST00000514536 RBMS3Q6XE24 437 aaKnown RBP11.42□□□□□ -0.58
USP46-209ENST00000514536 USP43Q70EL4 1123 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 SUMF2Q8NBJ7 301 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 TSPAN14Q8NG11 270 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 SPATA3Q8NHX4 192 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 MRPS24Q96EL2 167 aaKnown RBP11.42□□□□□ -0.58
USP46-209ENST00000514536 COQ2Q96H96 371 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 ZNF48Q96MX3 618 aaPredicted RBP11.42□□□□□ -0.58
USP46-209ENST00000514536 ZNF714Q96N38 554 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 SELENOIQ9C0D9 397 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 GHRLQ9UBU3 117 aa11.42□□□□□ -0.58
USP46-209ENST00000514536 A0A087WXM4 84 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 MDFIC2A0A1B0GVS7 189 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 C17orf98A8MV24 154 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 CSN2P05814 226 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 MGMTP16455 207 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 GALP22466 123 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 HILS1P60008 231 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 GUCA2AQ02747 115 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 MPV17LQ2QL34 196 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 TUSC1Q2TAM9 212 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 DEFB112Q30KQ8 113 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 NCR3LG1Q68D85 454 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 C22orf42Q6IC83 251 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 HCP5Q6MZN7 132 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 BRICD5Q6PL45 260 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 TRAPPC6BQ86SZ2 158 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 LINC00596Q86U02 117 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 PNKDQ8N490 385 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 FAM46BQ96A09 425 aa11.41□□□□□ -0.58
USP46-209ENST00000514536 DPCDQ9BVM2 203 aaPredicted RBP11.41□□□□□ -0.58
USP46-209ENST00000514536 IFT22Q9H7X7 185 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms