RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 HOXB9P17482 250 aaPredicted RBP2.41□□□□□ -2.02
CHD1-211ENST00000514344 GPX2P18283 190 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 CFL1P23528 166 aaKnown RBP2.41□□□□□ -2.02
CHD1-211ENST00000514344 SLC15A1P46059 708 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 GLIPR1P48060 266 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 ABCE1P61221 599 aaKnown RBP2.41□□□□□ -2.02
CHD1-211ENST00000514344 AESQ08117 197 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 ST3GAL3Q11203 375 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 RAB40BQ12829 278 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 MMDQ15546 238 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 ASRGL1Q7L266 308 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 SLC16A13Q7RTY0 426 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 SPATA12Q7Z6I5 190 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 LINC00596Q86U02 117 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 OR8H3Q8N146 312 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 OR10A6Q8NH74 314 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 FBLIM1Q8WUP2 373 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 MFFQ9GZY8 342 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 OR10A2Q9H208 303 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 GTF2A1LQ9UNN4 478 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 PSG11Q9UQ72 335 aa2.41□□□□□ -2.02
CHD1-211ENST00000514344 AMMECR1Q9Y4X0 333 aaPredicted RBP2.41□□□□□ -2.02
CHD1-211ENST00000514344 DHRS12A0PJE2 317 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 FAM90A10PA6NDY2 464 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 DIRAS1O95057 198 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 CSN3P07498 182 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 ZP3P21754 424 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 BLVRBP30043 206 aaPredicted RBP2.4□□□□□ -2.02
CHD1-211ENST00000514344 SLC6A6P31641 620 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 PTGFRP43088 359 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 RAB7AP51149 207 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 RPS6KA3P51812 740 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 P2RX3P56373 397 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 FXYD6P3P58550 94 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 DEFA5Q01523 94 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 PRKCDQ05655 676 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 CKAP4Q07065 602 aaKnown RBP2.4□□□□□ -2.02
CHD1-211ENST00000514344 STX3Q13277 289 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 APOFQ13790 326 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 SNCBQ16143 134 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 LRRC36Q1X8D7 754 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 LGALS9BQ3B8N2 356 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 Q6ZWC4 215 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 PRSS45Q7RTY3 260 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 Q8N6K4 173 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 PROKR2Q8NFJ6 384 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 OR52J3Q8NH60 311 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 HAVCR2Q8TDQ0 301 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 ABHD5Q8WTS1 349 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 ZNRF4Q8WWF5 429 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 KIRREL1Q96J84 757 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 SNX22Q96L94 193 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 SORT1Q99523 831 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 TMEM120AQ9BXJ8 343 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 RANGRFQ9HD47 186 aaPredicted RBP2.4□□□□□ -2.02
CHD1-211ENST00000514344 SIGLEC7Q9Y286 467 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 POLDIP2Q9Y2S7 368 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 RAP2CQ9Y3L5 183 aa2.4□□□□□ -2.02
CHD1-211ENST00000514344 A0A087WUU8 490 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 OR5B21A6NL26 309 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 J3QT63 122 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 SIRPB1O00241 398 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 UBDO15205 165 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 MOSP00540 346 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 ATF4P18848 351 aaPredicted RBP2.4□□□□□ -2.03
CHD1-211ENST00000514344 EDN2P20800 178 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 PPIBP23284 216 aaKnown RBP2.4□□□□□ -2.03
CHD1-211ENST00000514344 KLF5Q13887 457 aaPredicted RBP2.4□□□□□ -2.03
CHD1-211ENST00000514344 EBI3Q14213 229 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 AGKQ53H12 422 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 Q6ZRM9 215 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 TRMT10CQ7L0Y3 403 aaKnown RBP2.4□□□□□ -2.03
CHD1-211ENST00000514344 OR5A2Q8NGI9 324 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 OR6K6Q8NGW6 343 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 RFESDQ8TAC1 157 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 DYNLRB2Q8TF09 96 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 DHRS1Q96LJ7 313 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 CCDC140Q96MF4 163 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 FAM103A1Q9BTL3 118 aaKnown RBP2.4□□□□□ -2.03
CHD1-211ENST00000514344 ZCCHC4Q9H5U6 513 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 HES4Q9HCC6 221 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 ABCB9Q9NP78 766 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 SDR39U1Q9NRG7 319 aaPredicted RBP2.4□□□□□ -2.03
CHD1-211ENST00000514344 TP53TG1Q9Y2A0 90 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 VPS13BQ7Z7G8 4022 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 IGHV7-81A0A0B4J1V7 117 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 ZNF593O00488 134 aaPredicted RBP2.4□□□□□ -2.03
CHD1-211ENST00000514344 HSPB6O14558 160 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 HAND1O96004 215 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 IFNA10P01566 189 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 TRBV12-3P01733 135 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 P0DMU3 169 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 FAM231AP0DMU4 169 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 FAM231CP0DMU5 169 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 FCGR2BP31994 310 aaPredicted RBP2.4□□□□□ -2.03
CHD1-211ENST00000514344 KIR2DS2P43631 304 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 ACTBP60709 375 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 STX1BP61266 288 aa2.4□□□□□ -2.03
CHD1-211ENST00000514344 GRB2P62993 217 aaKnown RBP2.4□□□□□ -2.03
CHD1-211ENST00000514344 NDPQ00604 133 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms